Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p37610 Brassica napus
Aa31LG4G9240 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5612 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5613 Anthoceros agrestis
Actinidia09912 Actinidia chinensis
Actinidia16901 Actinidia chinensis
Actinidia29358 Actinidia chinensis
Ah.11g049400 Amaranthus hybridus
AL2G30885 Arabidopsis lyrata
AL2G30900 Arabidopsis lyrata
Aqoxy2G00735 Aquilegia oxysepala
Aqoxy5G00868 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7LJM3H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A4ASB6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KU2W2N Arachis hypogaea
AT1G71270 Arabidopsis thaliana
AT1G71300 Arabidopsis thaliana
ATR0580G447 Amborella trichopoda
Atru.chr13.2589 Acer truncatum
AUR62011839 Chenopodium quinoa
AUR62024682 Chenopodium quinoa
BcaB03g14885 Brassica carinata
BcaC08g46563 Brassica carinata
BolC6t39595H Brassica oleracea
BraA07t31323Z Brassica rapa
C06p45370 Brassica napus
C06p46170 Brassica napus
C06p46210 Brassica napus
C06p46260 Brassica napus
CAN.G473.93 Capsicum annuum
CANSAT01G1169 Cannabis sativa
CARHR064590 Cardamine hirsuta
CARHR152420 Cardamine hirsuta
Carub.0002s1815 Capsella rubella
Carub.0002s1817 Capsella rubella
Ca_09987_v3 Cicer arietinum L.
CBR_g54934 Chara braunii
Cc10_g16170 Coffea canephora
CDE03G0141 Ceratophyllum demersum
CDE03G0281 Ceratophyllum demersum
Cfa008036 Carpinus fangiana
Cfa027264 Carpinus fangiana
Ciclev10019077m.g Citrus clementina
CiPaw.03G012300 Carya illinoinensis
CiPaw.04G008600 Carya illinoinensis
ClCG11G008260 Citrullus lanatus
COL.COLO4_00397 Corchorus olitorius
COL.COLO4_23503 Corchorus olitorius
COL.COLO4_33595 Corchorus olitorius
COL.COLO4_37491 Corchorus olitorius
COL.COLO4_37492 Corchorus olitorius
Cpa.g.sc249.10 Carica papaya
Cre08.g367200 Chlamydomonas reinhardtii
CsaV3_2G033380 Cucumis sativus L.
CSS0001083 Camellia sinensis var. sinensis
CSS0008451 Camellia sinensis var. sinensis
CSS0031487 Camellia sinensis var. sinensis
DCAR_024855 Daucus carota
Dinv22060 Davidia involucrata
Duzib177G1138 Durio zibethinus
ECA246G0284 Erigeron canadensis
EL10Ac2g03252 Beta vulgaris
EL10As5g23498 Beta vulgaris
Eucgr.C04264 Eucalyptus grandis
FAN14G0768 Fragaria x ananassa
FAN19G3045 Fragaria x ananassa
FAN24G1765 Fragaria x ananassa
FAN25G2786 Fragaria x ananassa
FvH4_2g00140 Fragaria vesca
FvH4_6g22200 Fragaria vesca
Glyma.03G252000 Glycine max
Glyma.19G249400 Glycine max
Gohir.A05G251400 Gossypium hirsutum
Gohir.D05G252400 Gossypium hirsutum
Gorai.009G264800 Gossypium raimondii
GSVIVG01012102001 Vitis vinifera
GSVIVG01018671001 Vitis vinifera
HanXRQChr05g0150611 Helianthus annuus
HanXRQChr10g0312231 Helianthus annuus
Haze_02242 Corylus avellana
Haze_02247 Corylus avellana
Haze_14000 Corylus avellana
Hma1.2p1_0016F.1_g011010 Hydrangea macrophylla
HPP92_006235 Vanilla planifolia
HPP92_006236 Vanilla planifolia
HPP92_006237 Vanilla planifolia
HPP92_006290 Vanilla planifolia
HPP92_006305 Vanilla planifolia
HPP92_006372 Vanilla planifolia
Hund19535 Selenicereus undatus
Hund19537 Selenicereus undatus
Lalb_Chr04g0261991 Lupinus albus
Lj5g0027584 Lotus japonicus
Lj7C415G17 Lonicera japonica
Lsat_1_v5_gn_6_109860 Lactuca sativa
Manes.15G103100 Manihot esculenta
Mapoly0091s0001 Marchantia polymorpha
MBI13_g40627_MAGBIO Magnolia biondii
MBI13_g40628_MAGBIO Magnolia biondii
MBI16_g23303_MAGBIO Magnolia biondii
MBI16_g41537_MAGBIO Magnolia biondii
MCO11G104 Micromonas commoda
MD08G1244900 Malus domestica
MD15G1440000 Malus domestica
Medtr1g079770 Medicago truncatula
MELO3C008109.2 Cucumis melo
Migut.C00321 Erythranthe guttata
Migut.G00904 Erythranthe guttata
MSTRG.22475 Avicennia marina
Nitab4.5_0000079g0120 Nicotiana tabacum
Nitab4.5_0002887g0010 Nicotiana tabacum
Nitab4.5_0006062g0030 Nicotiana tabacum
Nitab4.5_0007117g0020 Nicotiana tabacum
Nitab4.5_0007150g0080 Nicotiana tabacum
Nn6g32085 Nelumbo nucifera
Oeu020638.1 Olea europaea
Oeu028617.1 Olea europaea
Os03g0417900 Oryza sativa ssp. japonica
Os10g0488300 Oryza sativa ssp. japonica
Peaxi162Scf00078g01141 Petunia axillaris
PGR031G1280 Punica granatum
Phvul.006G106700 Phaseolus vulgaris
Potri.006G027100 Populus trichocarpa
Pp3c4_27380 Physcomitrium patens
PRCOL_00005416 Prasinoderma coloniale
Prupe.1G566400 Prunus persica
Psat6g142240 Pisum sativum
PSO210G1668 Papaver somniferum
PSO761G0081 Papaver somniferum
QL04p036179 Quercus lobata
QL09p001201 Quercus lobata
QL09p008022 Quercus lobata
RcHm_v2.0_Chr6g0249411 Rosa chinensis
Rhsim01G0101300 Rhododendron simsii
Rhsim02G0174700 Rhododendron simsii
Rhsim02G0174800 Rhododendron simsii
Sabra06G0020300 Salix brachista
SalBow6G1408 Salvia bowleyana
SalBow6G7193 Salvia bowleyana
Sc17g0000550 Simmondsia chinensis
Sed0024292 Sechium edule
SEGI_19884 Sequoiadendron giganteum
SEGI_21093 Sequoiadendron giganteum
SGA_v2.0_scaffold123G33447 Striga asiatica
SGA_v2.0_scaffold154G37198 Striga asiatica
SGA_v2.0_scaffold227G43197 Striga asiatica
SHI24508 Sapria himalayana
SMO304G0018 Selaginella moellendorffii
Solyc02g094090.4 Solanum lycopersicum
Sopen02g038710 Solanum pennellii
Sp5g26470 Schrenkiella parvula
TAR628G0944 Trochodendron aralioides
THA.LOC104803377 Tarenaya hassleriana
THA.LOC104823378 Tarenaya hassleriana
Thecc.08G188100 Theobroma cacao
Thhalv10018205m.g Eutrema salsugineum
TPR.G10262 Trifolium pratense
TWI12G0377 Tripterygium wilfordii
unitig_37.g12692 Utricularia gibba
vmacro06107 Vaccinium macrocarpon
vmacro23409 Vaccinium macrocarpon
VMungo0540G0979 Vigna mungo
Zm00001eb045280 Zea mays
Zm00001eb378040 Zea mays
Zm00001eb393130 Zea mays

User provided reference genes

Program Settings