Gene: Sopen02g038710
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen02g038710
- Transcript Identifier Sopen02g038710.2
- Gene Type Coding gene
- Location Spenn-ch02 : 59166400-59183260 : negative
Gene Family Information
- ID HOM05D004330
- #Genes/#Species 165/99
- Phylogenetic origin
- ID ORTHO05D005182
- #Genes/#Species 163/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen02g038710.2
Descriptions
- Description Encodes a homolog of the yeast Vps52p/SAC2. Involved in pollen tube germination and growth. Located in multiple endomembrane organelles including the golgi. The yeast protein has been shown to be located at the late Golgi and to function in a complex involved in retrograde trafficking of vesicles between the early endosomal compartment and the trans-Golgi network. | POKY POLLEN TUBE (POK) | CONTAINS InterPro DOMAIN/s: Vps52/Sac2 | BEST Arabidopsis thaliana protein match is: Vps52 / Sac2 family
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009860 | ISO | PLAZA Integrative Orthology | pollen tube growth | AT1G71270 |
GO:0019953 | ISO | PLAZA Integrative Orthology | sexual reproduction | AT1G71270 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G71270 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0000938 | ISO | PLAZA Integrative Orthology | GARP complex | AT1G71270 |
GO:0012505 | ISO | PLAZA Integrative Orthology | endomembrane system | AT1G71270 |
GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT1G71270 |
GO:0000139 | ISO | PLAZA Integrative Orthology | Golgi membrane | AT1G71270 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
22.3.4.8.2 | Vesicle trafficking.post-Golgi trafficking.vesicle tethering.GARP/EARP complexes.component VPS52/POK |