Gene: Sopen02g038710

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g038710
  • Transcript Identifier Sopen02g038710.2
  • Gene Type Coding gene
  • Location Spenn-ch02 : 59166400-59183260 : negative

Gene Family Information

  • ID HOM05D004330
  • #Genes/#Species 165/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g038710.2

Descriptions

  • Description Encodes a homolog of the yeast Vps52p/SAC2. Involved in pollen tube germination and growth. Located in multiple endomembrane organelles including the golgi. The yeast protein has been shown to be located at the late Golgi and to function in a complex involved in retrograde trafficking of vesicles between the early endosomal compartment and the trans-Golgi network. | POKY POLLEN TUBE (POK) | CONTAINS InterPro DOMAIN/s: Vps52/Sac2 | BEST Arabidopsis thaliana protein match is: Vps52 / Sac2 family
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009860
ISO
PLAZA Integrative Orthologypollen tube growth AT1G71270
GO:0019953
ISO
PLAZA Integrative Orthologysexual reproduction AT1G71270

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G71270

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000938
ISO
PLAZA Integrative OrthologyGARP complex AT1G71270
GO:0012505
ISO
PLAZA Integrative Orthologyendomembrane system AT1G71270
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT1G71270
GO:0000139
ISO
PLAZA Integrative OrthologyGolgi membrane AT1G71270

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007258 Vps52
IPR016159 Cullin repeat-like-containing domain superfamily
Mapman id Description
22.3.4.8.2 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.GARP/EARP complexes.component VPS52/POK