Gene: Solyc02g094090.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g094090.4
  • Transcript Identifier Solyc02g094090.4.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 52807980-52824896 : negative

Gene Family Information

  • ID HOM05D004330
  • #Genes/#Species 165/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g094090.4.1
  • uniprot A0A3Q7G094
  • gene_id Solyc02g094090

Descriptions

  • Description Vacuolar protein sorting-associated protein 52 A (AHRD V3.3 *** A0A1U8FR82_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015031
IEA
GOA Databaseprotein transport
GO:0042147
IBA
GOA Databaseretrograde transport, endosome to Golgi
GO:0006896
IBA
GOA DatabaseGolgi to vacuole transport
GO:0032456
IBA
GOA Databaseendocytic recycling
GO:0009860
ISO
PLAZA Integrative Orthologypollen tube growth AT1G71270
GO:0019953
ISO
PLAZA Integrative Orthologysexual reproduction AT1G71270

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019905
IBA
GOA Databasesyntaxin binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G71270

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IEA
GOA Databasecytosol
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0000938
IBA
GOA DatabaseGARP complex
GO:0012505
ISO
PLAZA Integrative Orthologyendomembrane system AT1G71270
GO:0000139
ISO
PLAZA Integrative OrthologyGolgi membrane AT1G71270

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016159 Cullin repeat-like-containing domain superfamily
IPR007258 Vps52
Mapman id Description
22.3.4.8.2 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.GARP/EARP complexes.component VPS52/POK