Gene: AT1G71300

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G71300
  • Transcript Identifier AT1G71300.1
  • Gene Type Coding gene
  • Location Chr1 : 26874064-26878319 : positive

Gene Family Information

  • ID HOM05D004330
  • #Genes/#Species 165/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G71300.1
  • uniprot Q9FVV6

Descriptions

  • Description Vps52 / Sac2 family
  • Computational description Vps52 / Sac2 family ; CONTAINS InterPro DOMAIN/s: Vps52/Sac2 (InterPro:IPR007258); BEST Arabidopsis thaliana protein match is: Vps52 / Sac2 family (TAIR:AT1G71270.1); Has 611 Blast hits to 569 proteins in 208 species: Archae - 8; Bacteria - 23; Metazoa - 207; Fungi - 140; Plants - 62; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042147
IBA
Gene Ontologyretrograde transport, endosome to Golgi1
GO:0032456
IBA
Gene Ontologyendocytic recycling1
GO:0006896
IBA
Gene OntologyGolgi to vacuole transport1
GO:0015031
IEA
GOA Databaseprotein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019905
IBA
Gene Ontologysyntaxin binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISM
Gene Ontologyplasma membrane
GO:0000938
IBA
Gene OntologyGARP complex1
GO:0005829
IEA
GOA Databasecytosol
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0000139
IEA
GOA DatabaseGolgi membrane
GO:0010008
IEA
GOA Databaseendosome membrane
GO:0005768
IEA
GOA Databaseendosome
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007258 Vps52
Mapman id Description
22.3.4.8.2 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.GARP/EARP complexes.component VPS52/POK