Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p41270 Brassica napus
A02p04770 Brassica napus
A03p08690 Brassica napus
Aa31LG11G11430 Aethionema arabicum
Aa31LG5G14500 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2901 Anthoceros agrestis
Actinidia22083 Actinidia chinensis
Actinidia30553 Actinidia chinensis
Ah.06g191800 Amaranthus hybridus
Ah.13g075350 Amaranthus hybridus
AL3G13810 Arabidopsis lyrata
AL6G29380 Arabidopsis lyrata
Aqoxy1G00486 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JDMG7B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PLSY77 Arachis hypogaea
AT3G03920 Arabidopsis thaliana
AT5G18180 Arabidopsis thaliana
ATR0697G007 Amborella trichopoda
Atru.chr10.1764 Acer truncatum
Atru.chr13.534 Acer truncatum
Atru.chr2.3197 Acer truncatum
Atru.chr4.2011 Acer truncatum
Atru.chr5.2060 Acer truncatum
Atru.chr5.2062 Acer truncatum
Atru.chr5.2304 Acer truncatum
Atru.chr6.7 Acer truncatum
AUR62032690 Chenopodium quinoa
BcaB01g05179 Brassica carinata
BcaB05g23300 Brassica carinata
BcaB08g36698 Brassica carinata
BcaC03g13582 Brassica carinata
BcaNung05743 Brassica carinata
BcaNung05745 Brassica carinata
BNapus_Darmor_BZH_scaffold_78p00440 Brassica napus
BolC1t05799H Brassica oleracea
BolC2t06882H Brassica oleracea
BolC2t11912H Brassica oleracea
BolC3t13499H Brassica oleracea
BolC9t58722H Brassica oleracea
BraA01t04550Z Brassica rapa
BraA02t05436Z Brassica rapa
BraA03t10192Z Brassica rapa
BraA10t42874Z Brassica rapa
C02p09730 Brassica napus
C02p58510 Brassica napus
C03p10140 Brassica napus
C09p58800 Brassica napus
CAN.G960.49 Capsicum annuum
CANSAT78G0749 Cannabis sativa
CARHR078040 Cardamine hirsuta
CARHR194880 Cardamine hirsuta
Carub.0003s0316 Capsella rubella
Carub.0006s1646 Capsella rubella
Ca_08267_v3 Cicer arietinum L.
CBR_g48747 Chara braunii
Cc06_g22960 Coffea canephora
CDE06G0359 Ceratophyllum demersum
Cfa016441 Carpinus fangiana
CiPaw.09G001900 Carya illinoinensis
ClCG04G005310 Citrullus lanatus
COL.COLO4_13597 Corchorus olitorius
COL.COLO4_13598 Corchorus olitorius
Cpa.g.sc51.114 Carica papaya
Cre13.g567850 Chlamydomonas reinhardtii
CsaV3_4G013280 Cucumis sativus L.
CSS0045523 Camellia sinensis var. sinensis
Dinv14579 Davidia involucrata
Dinv37014 Davidia involucrata
Duzib106G1401 Durio zibethinus
Duzib177G0709 Durio zibethinus
ECA233G5487 Erigeron canadensis
EL10Ac3g06820 Beta vulgaris
FAN19G1796 Fragaria x ananassa
FAN23G0170 Fragaria x ananassa
FAN26G2823 Fragaria x ananassa
FAN28G2413 Fragaria x ananassa
FvH4_1g30320 Fragaria vesca
Glyma.16G041400 Glycine max
Glyma.19G110900 Glycine max
Gohir.A08G213200 Gossypium hirsutum
Gohir.A11G296500 Gossypium hirsutum
Gohir.D08G230300 Gossypium hirsutum
Gohir.D11G310400 Gossypium hirsutum
Gorai.004G244500 Gossypium raimondii
Gorai.007G343400 Gossypium raimondii
GSVIVG01033401001 Vitis vinifera
HanXRQChr05g0143841 Helianthus annuus
HanXRQChr07g0204461 Helianthus annuus
HanXRQChr08g0216931 Helianthus annuus
Haze_19418 Corylus avellana
Haze_19447 Corylus avellana
Hma1.2p1_0134F.1_g061640 Hydrangea macrophylla
HPP92_021240 Vanilla planifolia
Hund19236 Selenicereus undatus
Hund24835 Selenicereus undatus
Lalb_Chr14g0364491 Lupinus albus
Lalb_Chr22g0359191 Lupinus albus
Lj1g0021266 Lotus japonicus
Lsat_1_v5_gn_8_145841 Lactuca sativa
Lsat_1_v5_gn_8_24760 Lactuca sativa
Manes.08G144000 Manihot esculenta
Manes.09G141400 Manihot esculenta
Mapoly0086s0024 Marchantia polymorpha
MBI05_g05616_MAGBIO Magnolia biondii
MBI11_g31283_MAGBIO Magnolia biondii
MCO13G219 Micromonas commoda
MD00G1189600 Malus domestica
MD05G1045500 Malus domestica
Medtr7g085640 Medicago truncatula
MELO3C008801.2 Cucumis melo
Migut.J01888 Erythranthe guttata
MSTRG.19934 Avicennia marina
Nitab4.5_0002769g0090 Nicotiana tabacum
Nitab4.5_0004844g0050 Nicotiana tabacum
Nitab4.5_0007542g0010 Nicotiana tabacum
Nitab4.5_0009048g0010 Nicotiana tabacum
Nn7g35851 Nelumbo nucifera
Oeu035720.1 Olea europaea
Oeu035726.1 Olea europaea
Oeu049600.1 Olea europaea
Oeu059999.1 Olea europaea
Os11g0579800 Oryza sativa ssp. japonica
Peaxi162Scf00003g04832 Petunia axillaris
Peaxi162Scf00076g01048 Petunia axillaris
PGR142G1491 Punica granatum
PGSC0003DMG400008366 Solanum tuberosum
Phvul.001G110400 Phaseolus vulgaris
Potri.013G058400 Populus trichocarpa
Potri.019G034900 Populus trichocarpa
Pp3c25_15020 Physcomitrium patens
Pp3c5_28430 Physcomitrium patens
Prupe.8G064800 Prunus persica
Psat0s1971g0280 Pisum sativum
PSO063G0165 Papaver somniferum
PSO339G5713 Papaver somniferum
PSO384G0229 Papaver somniferum
PSO782G4796 Papaver somniferum
QL07p019530 Quercus lobata
RcHm_v2.0_Chr3g0490211 Rosa chinensis
Rhsim04G0087500 Rhododendron simsii
Sabra13G0051900 Salix brachista
Sabra19G0042500 Salix brachista
Sabra19G0044800 Salix brachista
SalBow5G4201 Salvia bowleyana
Sc25g0004980 Simmondsia chinensis
Sed0023399 Sechium edule
Sed0025621 Sechium edule
SEGI_32651 Sequoiadendron giganteum
SGA_v2.0_scaffold274G46513 Striga asiatica
SMO347G0554 Selaginella moellendorffii
Solyc10g078540.3 Solanum lycopersicum
Sopen10g029190 Solanum pennellii
Sp3g02890 Schrenkiella parvula
Sp6g26140 Schrenkiella parvula
TAR369G0512 Trochodendron aralioides
THA.LOC104802867 Tarenaya hassleriana
THA.LOC104827273 Tarenaya hassleriana
Thecc.05G294500 Theobroma cacao
Thhalv10014755m.g Eutrema salsugineum
Thhalv10021561m.g Eutrema salsugineum
TPR.G5895 Trifolium pratense
TWI32G1207 Tripterygium wilfordii
TWI34G0161 Tripterygium wilfordii
unitig_21.g20195 Utricularia gibba
unitig_744.g24550 Utricularia gibba
vmacro09141 Vaccinium macrocarpon
VMungo1383G2477 Vigna mungo
Zm00001eb114360 Zea mays
Zm00001eb200450 Zea mays
Zm00001eb274230 Zea mays

User provided reference genes

Program Settings