Gene: BraA10t42874Z
General Information
Structural Information
- Species Brassica rapa
- Gene Identifier BraA10t42874Z
- Transcript Identifier BraA10t42874Z
- Gene Type Coding gene
- Location A10 : 3247341-3248872 : positive
Gene Family Information
- ID HOM05D004151
- #Genes/#Species 170/94
- Phylogenetic origin
- ID ORTHO05D004775
- #Genes/#Species 171/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- uniprot A0A3P6D2X6
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019430 | IEA | GOA Database | removal of superoxide radicals | |
| GO:0006364 | IEA | GOA Database | rRNA processing | |
| GO:0042254 | IEA | GOA Database | ribosome biogenesis | |
| GO:0042254 | IEA | InterPro | ribosome biogenesis | |
| GO:0006801 | IEA | GOA Database | superoxide metabolic process | |
| GO:0006801 | IEA | InterPro | superoxide metabolic process | |
| GO:0001522 | IEA | GOA Database | pseudouridine synthesis | |
| GO:0001522 | IEA | InterPro | pseudouridine synthesis |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0004784 | IEA | GOA Database | superoxide dismutase activity | |
| GO:0004784 | IEA | InterPro | superoxide dismutase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005730 | IEA | GOA Database | nucleolus | |
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR009000 | Translation protein, beta-barrel domain superfamily |
| IPR036314 | Manganese/iron superoxide dismutase, C-terminal domain superfamily |
| IPR019832 | Manganese/iron superoxide dismutase, C-terminal |
| IPR007504 | H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 |
| IPR038664 | H/ACA RNP complex subunit Gar1/Naf1, Cbf5-binding domain |
| Mapman id | Description |
|---|---|
| 17.1.1.2.2.1.2 | Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.pseudouridylation.H/ACA small nucleolar ribonucleoprotein (snoRNP) rRNA pseudouridylation complex.core component Gar1 |