Gene: HanXRQChr05g0143841
General Information
Structural Information
- Species Helianthus annuus
- Gene Identifier HanXRQChr05g0143841
- Transcript Identifier HanXRQChr05g0143841.r1.2.494
- Gene Type Coding gene
- Location HanXRQChr05 : 119695448-119697142 : negative
Gene Family Information
- ID HOM05D004151
- #Genes/#Species 170/94
- Phylogenetic origin
- ID ORTHO05D004775
- #Genes/#Species 171/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id HanXRQChr05g0143841.r1.2
- pacid 40313124
Descriptions
- Description Putative H/ACA ribonucleoprotein complex, subunit Gar1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0001522 | ISO | PLAZA Homology (enrichment) | pseudouridine synthesis | HOM05D004151 |
| GO:0042254 | ISO | PLAZA Homology (enrichment) | ribosome biogenesis | HOM05D004151 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT3G03920 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT3G03920 |
| GO:0009535 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid membrane | AT5G18180 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR038664 | H/ACA RNP complex subunit Gar1/Naf1, Cbf5-binding domain |
| Mapman id | Description |
|---|---|
| 17.1.1.2.2.1.2 | Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.pseudouridylation.H/ACA small nucleolar ribonucleoprotein (snoRNP) rRNA pseudouridylation complex.core component Gar1 |