Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p34860 Brassica napus
A05p00620 Brassica napus
Aa31LG1G28520 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1245 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.1331 Anthoceros agrestis
Actinidia17925 Actinidia chinensis
Actinidia20972 Actinidia chinensis
Actinidia21373 Actinidia chinensis
Actinidia22797 Actinidia chinensis
AL4G46770 Arabidopsis lyrata
Aqoxy2G00845 Aquilegia oxysepala
Aqoxy4G02480 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BI9FA3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E9GQEB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F4ZKGQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TWIF5Z Arachis hypogaea
AT2G47210 Arabidopsis thaliana
ATR0564G334 Amborella trichopoda
Atru.chr5.940 Acer truncatum
AUR62011755 Chenopodium quinoa
AUR62024599 Chenopodium quinoa
BcaB02g08794 Brassica carinata
BcaB06g29458 Brassica carinata
BcaC02g06965 Brassica carinata
BcaC02g09008 Brassica carinata
BcaC02g09009 Brassica carinata
BcaC02g12586 Brassica carinata
BcaC02g12616 Brassica carinata
BolC4t21705H Brassica oleracea
BolC4t25515H Brassica oleracea
BolC4t25516H Brassica oleracea
BolC4t28750H Brassica oleracea
BolC4t28751H Brassica oleracea
BraA05t19061Z Brassica rapa
BraSC79t46677Z Brassica rapa
C04p00700 Brassica napus
C04p39490 Brassica napus
C04p39500 Brassica napus
C04p39510 Brassica napus
C04p72630 Brassica napus
CAN.G111.15 Capsicum annuum
CAN.G293.4 Capsicum annuum
CANSAT80G2876 Cannabis sativa
CARHR142600 Cardamine hirsuta
Carub.0004s2994 Capsella rubella
Carub.0004s2995 Capsella rubella
Ca_09227_v3 Cicer arietinum L.
Ca_10265_v3 Cicer arietinum L.
CBR_g3593 Chara braunii
Cc01_g21680 Coffea canephora
CDE10G1142 Ceratophyllum demersum
Cfa022451 Carpinus fangiana
Ciclev10020117m.g Citrus clementina
CiPaw.07G120600 Carya illinoinensis
CiPaw.08G086700 Carya illinoinensis
ClCG09G004890 Citrullus lanatus
COL.COLO4_23187 Corchorus olitorius
Cpa.g.sc18.100 Carica papaya
Cre03.g144907 Chlamydomonas reinhardtii
CsaV3_7G030200 Cucumis sativus L.
CSS0021664 Camellia sinensis var. sinensis
CSS0026841 Camellia sinensis var. sinensis
CSS0038119 Camellia sinensis var. sinensis
CSS0047407 Camellia sinensis var. sinensis
DCAR_017471 Daucus carota
DCAR_018267 Daucus carota
Dinv12116 Davidia involucrata
Dinv33143 Davidia involucrata
Dinv39081 Davidia involucrata
Duzib138G1200 Durio zibethinus
Duzib211G0108 Durio zibethinus
Duzib211G0650 Durio zibethinus
ECA236G0429 Erigeron canadensis
EL10As5g23605 Beta vulgaris
Eucgr.K03560 Eucalyptus grandis
FAN19G1384 Fragaria x ananassa
FAN23G2063 Fragaria x ananassa
FAN28G1198 Fragaria x ananassa
FvH4_1g26770 Fragaria vesca
Glyma.03G221500 Glycine max
Glyma.19G218500 Glycine max
Gohir.A08G120400 Gossypium hirsutum
Gohir.D08G141300 Gossypium hirsutum
Gorai.004G145300 Gossypium raimondii
GSVIVG01028163001 Vitis vinifera
GSVIVG01028167001 Vitis vinifera
HanXRQChr06g0168071 Helianthus annuus
Haze_05083 Corylus avellana
Hma1.2p1_0965F.1_g242130 Hydrangea macrophylla
HPP92_024389 Vanilla planifolia
Hund09662 Selenicereus undatus
Lalb_Chr04g0260041 Lupinus albus
Lalb_Chr06g0167021 Lupinus albus
Lalb_Chr18g0046551 Lupinus albus
Lj1A14G70 Lonicera japonica
Lj1A14G71 Lonicera japonica
Lj1C336G0 Lonicera japonica
Lj1g0001654 Lotus japonicus
Lj1g0004326 Lotus japonicus
Lj5g0012537 Lotus japonicus
Lsat_1_v5_gn_0_33621 Lactuca sativa
Lsat_1_v5_gn_2_7680 Lactuca sativa
Lsat_1_v5_gn_3_136441 Lactuca sativa
Lsat_1_v5_gn_8_147141 Lactuca sativa
Manes.05G012300 Manihot esculenta
Mapoly0092s0082 Marchantia polymorpha
Mapoly0165s0024 Marchantia polymorpha
MBI19_g36749_MAGBIO Magnolia biondii
MCO05G453 Micromonas commoda
MD01G1004200 Malus domestica
MD15G1342700 Malus domestica
Medtr1g086590 Medicago truncatula
Medtr7g109870 Medicago truncatula
MELO3C015904.2 Cucumis melo
Migut.D00054 Erythranthe guttata
MSTRG.21711 Avicennia marina
Nitab4.5_0000222g0120 Nicotiana tabacum
Nitab4.5_0010752g0020 Nicotiana tabacum
Nn2g12083 Nelumbo nucifera
Oeu042819.1 Olea europaea
Oeu044739.1 Olea europaea
Oeu062253.1 Olea europaea
Os05g0540800 Oryza sativa ssp. japonica
Peaxi162Scf00770g00128 Petunia axillaris
PGR083G0515 Punica granatum
PGSC0003DMG400009054 Solanum tuberosum
Phvul.001G214900 Phaseolus vulgaris
Potri.014G117400 Populus trichocarpa
Pp3c1_35180 Physcomitrium patens
Pp3c2_4040 Physcomitrium patens
PRCOL_00004506 Prasinoderma coloniale
Prupe.3G006800 Prunus persica
Psat3g019080 Pisum sativum
Psat6g160560 Pisum sativum
Psat6g160640 Pisum sativum
Psat6g160680 Pisum sativum
PSO210G5259 Papaver somniferum
PSO761G0652 Papaver somniferum
QL12p018794 Quercus lobata
RcHm_v2.0_Chr2g0114941 Rosa chinensis
RcHm_v2.0_Chr3g0486991 Rosa chinensis
Rhsim13G0002300 Rhododendron simsii
Sabra14G0087100 Salix brachista
SalBow3G0988 Salvia bowleyana
Sc24g0004180 Simmondsia chinensis
Sed0005540 Sechium edule
SEGI_29063 Sequoiadendron giganteum
SGA_v2.0_scaffold376G50305 Striga asiatica
SHI33153 Sapria himalayana
SHI33154 Sapria himalayana
SMO244G0096 Selaginella moellendorffii
Solyc01g079210.3 Solanum lycopersicum
Sopen01g030990 Solanum pennellii
Sp4g29200 Schrenkiella parvula
TAR362G0580 Trochodendron aralioides
TAR633G1592 Trochodendron aralioides
THA.LOC104802140 Tarenaya hassleriana
Thecc.01G319000 Theobroma cacao
Thhalv10001452m.g Eutrema salsugineum
TPR.G18531 Trifolium pratense
TPR.G31750 Trifolium pratense
TPR.G38442 Trifolium pratense
TPR.G4037 Trifolium pratense
TWI14G0575 Tripterygium wilfordii
TWI23G0480 Tripterygium wilfordii
unitig_736.g22928 Utricularia gibba
vmacro02380 Vaccinium macrocarpon
VMungo1383G1227 Vigna mungo
VMungo1383G2606 Vigna mungo
Zm00001eb235700 Zea mays

User provided reference genes

Program Settings