Gene: AT2G47210

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G47210
  • Transcript Identifier AT2G47210.2
  • Gene Type Coding gene
  • Location Chr2 : 19379039-19382204 : positive

Gene Family Information

  • ID HOM05D004146
  • #Genes/#Species 170/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G47210.2
  • uniprot Q8VZL6

Descriptions

  • Description myb-like transcription factor family protein
  • Computational description myb-like transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: N-terminal protein myristoylation, negative regulation of transcription, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), DNA methyltransferase 1-associated 1 (InterPro:IPR008468); Has 383 Blast hits to 375 proteins in 190 species: Archae - 0; Bacteria - 2; Metazoa - 140; Fungi - 145; Plants - 43; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006325
IEA
GOA Databasechromatin organization
GO:0043968
IEA
GOA Databasehistone H2A acetylation
GO:0043968
IBA
Gene Ontologyhistone H2A acetylation1
GO:0043968
IEA
InterProhistone H2A acetylation
GO:0043967
IEA
GOA Databasehistone H4 acetylation
GO:0043967
IBA
Gene Ontologyhistone H4 acetylation1
GO:0043967
IEA
InterProhistone H4 acetylation
GO:0006338
IEA
GOA Databasechromatin remodeling
GO:0006338
IEA
InterProchromatin remodeling
GO:0006281
IEA
Gene OntologyDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0045892
IEA
GOA Databasenegative regulation of transcription, DNA-templated
GO:0045892
IEA
InterPronegative regulation of transcription, DNA-templated
GO:0000122
IBA
Gene Ontologynegative regulation of transcription by RNA polymerase II1
GO:0043486
IBA
Gene Ontologyhistone exchange1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003714
IBA
Gene Ontologytranscription corepressor activity1
GO:0003677
IDA
Gene OntologyDNA binding2
GO:0005515
IPI
Gene Ontologyprotein binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035267
IDA
IEA
GOA DatabaseNuA4 histone acetyltransferase complex
GO:0035267
IBA
Gene OntologyNuA4 histone acetyltransferase complex1
GO:0035267
IEA
InterProNuA4 histone acetyltransferase complex
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA, IPI
ISM
Gene Ontologynucleus2 3
GO:0005634
IEA
InterPronucleus
GO:0000812
IDA
GOA DatabaseSwr1 complex
GO:0000812
IBA
Gene OntologySwr1 complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008468 DNA methyltransferase 1-associated 1
IPR001005 SANT/Myb domain
IPR027109 SWR1-complex protein 4/DNA methyltransferase 1-associated protein 1
IPR009057 Homeobox-like domain superfamily
IPR032563 DAMP1, SANT/Myb-like domain
Mapman id Description
12.3.1.1.5.3 Chromatin organisation.post-translational histone modification.histone acetylation.NuA4 histone acetyltransferase complex.module shared with NuA4/SWR1 complexes.recruitment factor component SWC4
12.4.4.7.3 Chromatin organisation.nucleosome remodeling.SWR1 chromatin remodeling complex.SWR1/NuA4-complexes shared module.recruitment factor component SWC4