Gene: Os05g0540800

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os05g0540800
  • Transcript Identifier Os05t0540800-01
  • Gene Type Coding gene
  • Location chr05 : 26849983-26856458 : positive

Gene Family Information

  • ID HOM05D004146
  • #Genes/#Species 170/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os05t0540800-01
  • MSU-ID LOC_Os05g46330.1
  • uniprot Q5TKQ2

Descriptions

  • Description Similar to DNA methyltransferase 1-associated protein 1.
  • Description Homeodomain-like containing protein.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045892
ISO
PLAZA Homology (enrichment)negative regulation of transcription, DNA-templated HOM05D004146
GO:0043968
IBA
IEA
GOA Databasehistone H2A acetylation
GO:0043968
IEA
InterProhistone H2A acetylation
GO:0043967
IBA
IEA
GOA Databasehistone H4 acetylation
GO:0043967
IEA
InterProhistone H4 acetylation
GO:0006338
IEA
GOA Databasechromatin remodeling
GO:0006338
IEA
InterProchromatin remodeling
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0000122
IBA
GOA Databasenegative regulation of transcription by RNA polymerase II
GO:0043486
IBA
GOA Databasehistone exchange

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003714
IBA
GOA Databasetranscription corepressor activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G47210
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035267
IBA
IEA
GOA DatabaseNuA4 histone acetyltransferase complex
GO:0035267
IEA
InterProNuA4 histone acetyltransferase complex
GO:0000812
IBA
IEA
GOA DatabaseSwr1 complex
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032563 DAMP1, SANT/Myb-like domain
IPR001005 SANT/Myb domain
IPR027109 SWR1-complex protein 4/DNA methyltransferase 1-associated protein 1
IPR009057 Homeobox-like domain superfamily
Mapman id Description
12.3.1.1.5.3 Chromatin organisation.post-translational histone modification.histone acetylation.NuA4 histone acetyltransferase complex.module shared with NuA4/SWR1 complexes.recruitment factor component SWC4
12.4.4.7.3 Chromatin organisation.nucleosome remodeling.SWR1 chromatin remodeling complex.SWR1/NuA4-complexes shared module.recruitment factor component SWC4