Gene: TPR.G31750

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G31750
  • Transcript Identifier TPR.T32815
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_scaf_702 : 52641-63065 : positive

Gene Family Information

  • ID HOM05D004146
  • #Genes/#Species 170/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA32815.v2
  • id Tp57577_TGAC_v2_gene31750.v2
  • pacid 35986135

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
InterProDNA repair
GO:0006338
IEA
InterProchromatin remodeling
GO:0043967
IEA
InterProhistone H4 acetylation
GO:0043968
IEA
InterProhistone H2A acetylation
GO:0045892
ISO
PLAZA Homology (enrichment)negative regulation of transcription, DNA-templated HOM05D004146

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT2G47210
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G47210

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035267
IEA
InterProNuA4 histone acetyltransferase complex
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G47210
GO:0000812
ISO
PLAZA Integrative OrthologySwr1 complex AT2G47210

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027109 SWR1-complex protein 4/DNA methyltransferase 1-associated protein 1
IPR009057 Homeobox-like domain superfamily
IPR001005 SANT/Myb domain
IPR032563 DAMP1, SANT/Myb-like domain
Mapman id Description
12.3.1.1.5.3 Chromatin organisation.post-translational histone modification.histone acetylation.NuA4 histone acetyltransferase complex.module shared with NuA4/SWR1 complexes.recruitment factor component SWC4
12.4.4.7.3 Chromatin organisation.nucleosome remodeling.SWR1 chromatin remodeling complex.SWR1/NuA4-complexes shared module.recruitment factor component SWC4