Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p25010 Brassica napus
A05p05190 Brassica napus
A05p05210 Brassica napus
Aa31LG3G10940 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2863 Anthoceros agrestis
Actinidia06469 Actinidia chinensis
Actinidia26163 Actinidia chinensis
Ah.03g141930 Amaranthus hybridus
Ah.09g229690 Amaranthus hybridus
Ah.09g229700 Amaranthus hybridus
Ah.09g232800 Amaranthus hybridus
AL3G45050 Arabidopsis lyrata
AL4G38180 Arabidopsis lyrata
AL6G11500 Arabidopsis lyrata
Aqoxy6G03049 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FJZE1E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PV76CP Arachis hypogaea
AT2G40360 Arabidopsis thaliana
ATR0598G150 Amborella trichopoda
ATR0598G203 Amborella trichopoda
ATR0681G288 Amborella trichopoda
ATR0681G369 Amborella trichopoda
Atru.chr11.847 Acer truncatum
Atru.chr6.762 Acer truncatum
AUR62003266 Chenopodium quinoa
AUR62027202 Chenopodium quinoa
BcaB01g03295 Brassica carinata
BcaB02g08952 Brassica carinata
BcaC01g05160 Brassica carinata
BcaC01g05161 Brassica carinata
BcaC02g12241 Brassica carinata
BcaC02g12245 Brassica carinata
BolC3t15332H Brassica oleracea
BolC4t22236H Brassica oleracea
BraA03t11704Z Brassica rapa
BraA05t19492Z Brassica rapa
C03p29850 Brassica napus
C04p06060 Brassica napus
C04p06100 Brassica napus
CAN.G798.51 Capsicum annuum
CANSAT54G0881 Cannabis sativa
CARHR115520 Cardamine hirsuta
CARHR135440 Cardamine hirsuta
Carub.0004s2260 Capsella rubella
Carub.0008s0866 Capsella rubella
Ca_00047_v3 Cicer arietinum L.
CBR_g19000 Chara braunii
Cc07_g19170 Coffea canephora
Cc07_g19180 Coffea canephora
Cfa014311 Carpinus fangiana
Cfa026475 Carpinus fangiana
Ciclev10000416m.g Citrus clementina
CiPaw.05G006000 Carya illinoinensis
ClCG08G001520 Citrullus lanatus
ClCG09G010900 Citrullus lanatus
COL.COLO4_33567 Corchorus olitorius
Cpa.g.sc5814.1 Carica papaya
Cpa.g.sc612.1 Carica papaya
Cre10.g417950 Chlamydomonas reinhardtii
CsaV3_5G039580 Cucumis sativus L.
CSS0009525 Camellia sinensis var. sinensis
CSS0031590 Camellia sinensis var. sinensis
DCAR_001836 Daucus carota
Dinv07474 Davidia involucrata
Dinv19398 Davidia involucrata
Duzib147G1693 Durio zibethinus
Duzib264G0885 Durio zibethinus
ECA236G2574 Erigeron canadensis
EL10Ac6g14818 Beta vulgaris
Eucgr.G00349 Eucalyptus grandis
FAN04G2346 Fragaria x ananassa
FAN13G2390 Fragaria x ananassa
FAN18G3216 Fragaria x ananassa
FvH4_5g21650 Fragaria vesca
Glyma.12G167800 Glycine max
Glyma.16G003700 Glycine max
Gohir.A12G002500 Gossypium hirsutum
Gohir.D12G002200 Gossypium hirsutum
Gorai.008G001600 Gossypium raimondii
GSVIVG01004116001 Vitis vinifera
HanXRQChr07g0187421 Helianthus annuus
Haze_10066 Corylus avellana
Haze_10069 Corylus avellana
Haze_12759 Corylus avellana
Haze_26888 Corylus avellana
Hma1.2p1_0427F.1_g150710 Hydrangea macrophylla
HPP92_014183 Vanilla planifolia
HPP92_014184 Vanilla planifolia
Hund16551 Selenicereus undatus
Lalb_Chr21g0308271 Lupinus albus
Lalb_Chr21g0308281 Lupinus albus
Lj6g0001374 Lotus japonicus
Lj8C281T2 Lonicera japonica
Lj8C283T12 Lonicera japonica
Lju50A15T20 Lonicera japonica
Lsat_1_v5_gn_2_109841 Lactuca sativa
Lsat_1_v5_gn_5_138060 Lactuca sativa
Lsat_1_v5_gn_7_76380 Lactuca sativa
Manes.02G223500 Manihot esculenta
Mapoly0025s0073 Marchantia polymorpha
MBI13_g20493_MAGBIO Magnolia biondii
MCO01G460 Micromonas commoda
MD05G1062400 Malus domestica
MD10G1070100 Malus domestica
Medtr2g006020 Medicago truncatula
MELO3C022134.2 Cucumis melo
Migut.B00788 Erythranthe guttata
Migut.I00323 Erythranthe guttata
MSTRG.5116 Avicennia marina
Nitab4.5_0000948g0120 Nicotiana tabacum
Nitab4.5_0002596g0050 Nicotiana tabacum
Nn1g06242 Nelumbo nucifera
Oeu034147.1 Olea europaea
Peaxi162Scf00011g00938 Petunia axillaris
Peaxi162Scf00011g00939 Petunia axillaris
PGR042G0619 Punica granatum
PGSC0003DMG400024925 Solanum tuberosum
Phvul.006G218200 Phaseolus vulgaris
Potri.003G009600 Populus trichocarpa
Potri.004G222500 Populus trichocarpa
Pp3c18_14790 Physcomitrium patens
PRCOL_00006650 Prasinoderma coloniale
Prupe.6G114000 Prunus persica
Prupe.7G053600 Prunus persica
Psat0s1535g0080 Pisum sativum
Psat2g083520 Pisum sativum
PSO063G3695 Papaver somniferum
PSO339G3543 Papaver somniferum
PSO384G1237 Papaver somniferum
QL02p100166 Quercus lobata
RcHm_v2.0_Chr7g0209121 Rosa chinensis
RcHm_v2.0_Chr7g0209131 Rosa chinensis
RcHm_v2.0_Chr7g0241521 Rosa chinensis
RcHm_v2.0_Chr7g0241531 Rosa chinensis
RcHm_v2.0_Chr7g0241541 Rosa chinensis
Rhsim10G0097200 Rhododendron simsii
Rhsim11G0125000 Rhododendron simsii
RhsimUnG0241700 Rhododendron simsii
Sabra01G0168600 Salix brachista
Sabra03G0005000 Salix brachista
SalBow1G3184 Salvia bowleyana
SalBow8G0286 Salvia bowleyana
SalBow8G0646 Salvia bowleyana
SalBow8G2435 Salvia bowleyana
SalBow8G3818 Salvia bowleyana
Sc12g0003380 Simmondsia chinensis
Sed0024495 Sechium edule
SGA_v2.0_scaffold2705G54186 Striga asiatica
SGA_v2.0_scaffold272G46372 Striga asiatica
SGA_v2.0_scaffold304G47905 Striga asiatica
SGA_v2.0_scaffold476G52142 Striga asiatica
SGA_v2.0_scaffold4G02417 Striga asiatica
SGA_v2.0_scaffold94G28534 Striga asiatica
SMO004G0015 Selaginella moellendorffii
SMO361G0066 Selaginella moellendorffii
Solyc01g103720.4 Solanum lycopersicum
Sopen01g046130 Solanum pennellii
Sopen01g046140 Solanum pennellii
Sp4g27170 Schrenkiella parvula
TAR087G0001 Trochodendron aralioides
TAR376G0266 Trochodendron aralioides
TAR381G1335 Trochodendron aralioides
THA.LOC104801417 Tarenaya hassleriana
Thecc.01G149600 Theobroma cacao
Thhalv10001320m.g Eutrema salsugineum
TPR.G2118 Trifolium pratense
TWI23G0224 Tripterygium wilfordii
unitig_899.g15494 Utricularia gibba
vmacro19872 Vaccinium macrocarpon
VMungo0540G2254 Vigna mungo
Zm00001eb131370 Zea mays

User provided reference genes

Program Settings