Gene: C04p06100
General Information
Structural Information
- Species Brassica napus
- Gene Identifier C04p06100
- Transcript Identifier C04p06100
- Gene Type Coding gene
- Location C04 : 5161487-5168949 : negative
Gene Family Information
- ID HOM05D004134
- #Genes/#Species 171/96
- Phylogenetic origin
- ID ORTHO05D005240
- #Genes/#Species 161/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid C04p06100.1_BnaDAR
- v5 BnaC04g04050D
- single_cell_id C04p06100.1-BnaDAR
- ensembl GSBRNA2T00006155001
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006364 | IEA | InterPro | rRNA processing | |
| GO:0042545 | IEA | InterPro | cell wall modification | |
| GO:0042254 | IEA | InterPro | ribosome biogenesis | |
| GO:0051302 | ISO | PLAZA Integrative Orthology | regulation of cell division | AT2G40360 |
| GO:0007276 | ISO | PLAZA Integrative Orthology | gamete generation | AT2G40360 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0004857 | IEA | InterPro | enzyme inhibitor activity | |
| GO:0030599 | IEA | InterPro | pectinesterase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT2G40360 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR035513 | Invertase/pectin methylesterase inhibitor domain superfamily |
| IPR001680 | WD40 repeat |
| IPR006501 | Pectinesterase inhibitor domain |
| IPR011050 | Pectin lyase fold/virulence factor |
| IPR012953 | BOP1, N-terminal domain |
| IPR012334 | Pectin lyase fold |
| IPR000070 | Pectinesterase, catalytic |
| IPR028598 | WD repeat BOP1/Erb1 |
| IPR036322 | WD40-repeat-containing domain superfamily |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| Mapman id | Description |
|---|---|
| 17.1.2.2.1.10.2 | Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.pre-60S ribosomal subunit nuclear assembly.PES-BOP1-WDR12 (PeBoW) complex.component BOP1 |