Gene: Sopen01g046140

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g046140
  • Transcript Identifier Sopen01g046140.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 102830246-102835141 : negative

Gene Family Information

  • ID HOM05D004134
  • #Genes/#Species 171/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g046140.1

Descriptions

  • Description Transducin/WD40 repeat-like superfamily protein | FUNCTIONS IN: nucleotide binding | INVOLVED IN: rRNA processing | LOCATED IN: nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat, conserved site , WD40 repeat , BOP1, N-terminal , WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: HEAT repeat , WD domain, G-beta repeat protein protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IEA
InterProrRNA processing
GO:0042254
IEA
InterProribosome biogenesis
GO:0051302
ISO
PLAZA Integrative Orthologyregulation of cell division AT2G40360
GO:0007276
ISO
PLAZA Integrative Orthologygamete generation AT2G40360

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT2G40360

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012953 BOP1, N-terminal domain
IPR001680 WD40 repeat
IPR036322 WD40-repeat-containing domain superfamily
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR028598 WD repeat BOP1/Erb1
Mapman id Description
17.1.2.2.1.10.2 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.pre-60S ribosomal subunit nuclear assembly.PES-BOP1-WDR12 (PeBoW) complex.component BOP1