Gene: Solyc01g103720.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g103720.4
  • Transcript Identifier Solyc01g103720.4.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 84559270-84564376 : negative

Gene Family Information

  • ID HOM05D004134
  • #Genes/#Species 171/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g103720.4.1
  • uniprot A0A3Q7ERJ1
  • gene_id Solyc01g103720

Descriptions

  • Description Ribosome biogenesis protein BOP1 homolog (AHRD V3.3 *** A0A2G2Y2H0_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IEA
GOA DatabaserRNA processing
GO:0006364
IEA
InterProrRNA processing
GO:0007276
ISO
PLAZA Integrative Orthologygamete generation AT2G40360
GO:0051302
ISO
PLAZA Integrative Orthologyregulation of cell division AT2G40360
GO:0000463
IBA
IEA
GOA Databasematuration of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000105
IEA
GOA Databasehistidine biosynthetic process
GO:0042254
IEA
GOA Databaseribosome biogenesis
GO:0042254
IEA
InterProribosome biogenesis
GO:0000466
IEA
GOA Databasematuration of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0042273
IEA
GOA Databaseribosomal large subunit biogenesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043021
IBA
IEA
GOA Databaseribonucleoprotein complex binding
GO:0003879
IEA
GOA DatabaseATP phosphoribosyltransferase activity
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030687
IBA
IEA
GOA Databasepreribosome, large subunit precursor
GO:0070545
IBA
GOA DatabasePeBoW complex
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005654
IEA
GOA Databasenucleoplasm
GO:0005634
IEA
GOA Databasenucleus
GO:0005730
IEA
GOA Databasenucleolus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012953 BOP1, N-terminal domain
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR001680 WD40 repeat
IPR028598 WD repeat BOP1/Erb1
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
17.1.2.2.1.10.2 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.pre-60S ribosomal subunit nuclear assembly.PES-BOP1-WDR12 (PeBoW) complex.component BOP1