Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p39430 Brassica napus
A06p36880 Brassica napus
Aa31LG11G9990 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2826 Anthoceros agrestis
Actinidia11698 Actinidia chinensis
Actinidia17731 Actinidia chinensis
AL6G38510 Arabidopsis lyrata
Aqoxy2G02412 Aquilegia oxysepala
Aqoxy5G02863 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.936SG4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XTWP4U Arachis hypogaea
AT5G26680 Arabidopsis thaliana
ATR0693G183 Amborella trichopoda
Atru.chr12.1514 Acer truncatum
Atru.chr9.43 Acer truncatum
AUR62003554 Chenopodium quinoa
AUR62017868 Chenopodium quinoa
BcaB04g19723 Brassica carinata
BcaC03g17876 Brassica carinata
BolC2t11970H Brassica oleracea
BolC7t44696H Brassica oleracea
BraA06t26613Z Brassica rapa
C02p59150 Brassica napus
C07p41620 Brassica napus
CAN.G1248.3 Capsicum annuum
CARHR186910 Cardamine hirsuta
Carub.0006s2428 Capsella rubella
Ca_10214_v3 Cicer arietinum L.
CBR_g39652 Chara braunii
Cc02_g36030 Coffea canephora
CDE09G0142 Ceratophyllum demersum
CDE09G0469 Ceratophyllum demersum
CDE09G0492 Ceratophyllum demersum
CDE09G0829 Ceratophyllum demersum
Ciclev10028527m.g Citrus clementina
CiPaw.02G000700 Carya illinoinensis
ClCG03G017940 Citrullus lanatus
COL.COLO4_28215 Corchorus olitorius
Cpa.g.sc48.229 Carica papaya
Cre03.g145687 Chlamydomonas reinhardtii
CsaV3_1G038240 Cucumis sativus L.
CSS0017748 Camellia sinensis var. sinensis
CSS0027931 Camellia sinensis var. sinensis
CSS0029807 Camellia sinensis var. sinensis
CSS0040713 Camellia sinensis var. sinensis
DCAR_029304 Daucus carota
Dinv30957 Davidia involucrata
Duzib128G0320 Durio zibethinus
ECA236G4503 Erigeron canadensis
EL10Ac6g15321 Beta vulgaris
Eucgr.B01326 Eucalyptus grandis
Eucgr.B01328 Eucalyptus grandis
Eucgr.B01329 Eucalyptus grandis
Eucgr.B01331 Eucalyptus grandis
Eucgr.B01335 Eucalyptus grandis
Eucgr.B01336 Eucalyptus grandis
Eucgr.B01339 Eucalyptus grandis
Eucgr.B01341 Eucalyptus grandis
Eucgr.B01342 Eucalyptus grandis
Eucgr.B01344 Eucalyptus grandis
Eucgr.B01346 Eucalyptus grandis
Eucgr.B01348 Eucalyptus grandis
Eucgr.B01834 Eucalyptus grandis
Eucgr.B01835 Eucalyptus grandis
Eucgr.H01340 Eucalyptus grandis
Eucgr.J01445 Eucalyptus grandis
FAN02G3718 Fragaria x ananassa
FAN05G2124 Fragaria x ananassa
FAN09G4770 Fragaria x ananassa
FvH4_6g08670 Fragaria vesca
Glyma.10G141800 Glycine max
Glyma.20G090300 Glycine max
Gohir.A09G086698 Gossypium hirsutum
Gohir.A10G176900 Gossypium hirsutum
Gohir.A13G114100 Gossypium hirsutum
Gohir.D03G046101 Gossypium hirsutum
Gohir.D04G082216 Gossypium hirsutum
Gohir.D04G090400 Gossypium hirsutum
Gohir.D05G317650 Gossypium hirsutum
Gohir.D05G358720 Gossypium hirsutum
Gohir.D06G151266 Gossypium hirsutum
Gohir.D06G153950 Gossypium hirsutum
Gohir.D07G145601 Gossypium hirsutum
Gohir.D07G182750 Gossypium hirsutum
Gohir.D09G043900 Gossypium hirsutum
Gohir.D10G183600 Gossypium hirsutum
Gohir.D13G088850 Gossypium hirsutum
Gohir.D13G117100 Gossypium hirsutum
Gorai.001G157600 Gossypium raimondii
Gorai.002G098200 Gossypium raimondii
Gorai.002G149500 Gossypium raimondii
Gorai.006G051000 Gossypium raimondii
Gorai.006G067700 Gossypium raimondii
Gorai.007G242800 Gossypium raimondii
Gorai.010G176300 Gossypium raimondii
Gorai.011G205800 Gossypium raimondii
Gorai.013G131700 Gossypium raimondii
GSVIVG01031344001 Vitis vinifera
HanXRQChr04g0116761 Helianthus annuus
HanXRQChr14g0443961 Helianthus annuus
Haze_15009 Corylus avellana
Haze_27230 Corylus avellana
HPP92_017212 Vanilla planifolia
HPP92_017311 Vanilla planifolia
Hund04404 Selenicereus undatus
Lalb_Chr02g0147401 Lupinus albus
Lalb_Chr02g0147411 Lupinus albus
Lalb_Chr02g0147421 Lupinus albus
Lalb_Chr06g0167231 Lupinus albus
Lj5C315T22 Lonicera japonica
Lj5g0001875 Lotus japonicus
Lsat_1_v5_gn_7_23500 Lactuca sativa
Manes.08G106600 Manihot esculenta
Manes.09G182200 Manihot esculenta
Mapoly0013s0018 Marchantia polymorpha
Mapoly0083s0081 Marchantia polymorpha
MBI18_g03859_MAGBIO Magnolia biondii
MCO07G337 Micromonas commoda
MD04G1184400 Malus domestica
Medtr1g085130 Medicago truncatula
MELO3C015225.2 Cucumis melo
Migut.K00044 Erythranthe guttata
Migut.N00980 Erythranthe guttata
MSTRG.20351 Avicennia marina
MSTRG.5173 Avicennia marina
Nitab4.5_0000541g0020 Nicotiana tabacum
Nitab4.5_0003511g0030 Nicotiana tabacum
Nn4g25324 Nelumbo nucifera
Oeu034769.2 Olea europaea
Os03g0834000 Oryza sativa ssp. japonica
Os05g0540100 Oryza sativa ssp. japonica
Peaxi162Scf00194g00323 Petunia axillaris
PGR031G0514 Punica granatum
PGR083G0274 Punica granatum
PGSC0003DMG400018278 Solanum tuberosum
Phvul.007G206500 Phaseolus vulgaris
Potri.013G000700 Populus trichocarpa
Pp3c11_1310 Physcomitrium patens
Pp3c2_30860 Physcomitrium patens
PRCOL_00001649 Prasinoderma coloniale
Prupe.6G302900 Prunus persica
Psat6g156480 Pisum sativum
PSO170G4013 Papaver somniferum
PSO210G0203 Papaver somniferum
PSO210G1262 Papaver somniferum
PSO357G0419 Papaver somniferum
PSO761G0576 Papaver somniferum
QL03p011251 Quercus lobata
RcHm_v2.0_Chr3g0458811 Rosa chinensis
Rhsim05G0124800 Rhododendron simsii
Sabra13G0000600 Salix brachista
SalBow1G5269 Salvia bowleyana
SalBow1G5332 Salvia bowleyana
SalBow4G0333 Salvia bowleyana
Sc07g0001850 Simmondsia chinensis
Sed0020210 Sechium edule
SEGI_09019 Sequoiadendron giganteum
SEGI_17973 Sequoiadendron giganteum
SEGI_28223 Sequoiadendron giganteum
SGA_v2.0_scaffold464G51994 Striga asiatica
SGA_v2.0_scaffold5G02926 Striga asiatica
SHI18007 Sapria himalayana
SMO201G0085 Selaginella moellendorffii
Solyc01g102370.4 Solanum lycopersicum
Sopen01g044820 Solanum pennellii
Sp2g21320 Schrenkiella parvula
TAR362G1038 Trochodendron aralioides
TAR629G1113 Trochodendron aralioides
TAR633G1950 Trochodendron aralioides
TAR633G2595 Trochodendron aralioides
THA.LOC104818763 Tarenaya hassleriana
Thecc.05G330900 Theobroma cacao
Thhalv10004386m.g Eutrema salsugineum
TPR.G34902 Trifolium pratense
TWI12G0833 Tripterygium wilfordii
TWI56G0733 Tripterygium wilfordii
vmacro19799 Vaccinium macrocarpon
VMungo0720G2099 Vigna mungo
Zm00001eb211370 Zea mays
Zm00001eb294290 Zea mays

User provided reference genes

Program Settings