Gene: ATR0693G183

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR0693G183
  • Transcript Identifier ATR0693G183.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00003 : 2221479-2233175 : negative

Gene Family Information

  • ID HOM05D003868
  • #Genes/#Species 180/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00003.122.v1.0
  • pacid 31565616

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009411
ISO
PLAZA Integrative Orthologyresponse to UV AT5G26680

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004518
IEA
InterPronuclease activity
GO:0003677
IEA
InterProDNA binding
GO:0003824
IEA
InterProcatalytic activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Os05g0540100
GO:0048256
ISO
PLAZA Integrative Orthologyflap endonuclease activity AT5G26680

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G26680
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus Os05g0540100

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006084 XPG/Rad2 endonuclease
IPR006086 XPG-I domain
IPR006085 XPG, N-terminal
IPR029060 PIN-like domain superfamily
IPR008918 Helix-hairpin-helix motif, class 2
IPR036279 5'-3' exonuclease, C-terminal domain superfamily
Mapman id Description
13.2.4.2 Cell cycle organisation.DNA replication.maturation.flap structure-specific endonuclease (FEN1)
14.5.8 DNA damage response.base excision repair (BER).flap structure-specific endonuclease (FEN1)