Gene: Pp3c2_30860
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c2_30860
- Transcript Identifier Pp3c2_30860V3.1
- Gene Type Coding gene
- Location Chr02 : 20621493-20625538 : positive
Gene Family Information
- ID HOM05D003868
- #Genes/#Species 180/95
- Phylogenetic origin
- ID ORTHO05D005364
- #Genes/#Species 159/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c2_30860V3.1
- pacid 32937048
- alias Phypa_200726
- alias Phpat.002G127000
- alias Pp1s456_8V6
- uniprot A0A2K1L3R6
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006260 | IEA | GOA Database | DNA replication | |
| GO:0009411 | ISO | PLAZA Integrative Orthology | response to UV | AT5G26680 |
| GO:0006974 | IEA | GOA Database | cellular response to DNA damage stimulus | |
| GO:0006281 | IEA | GOA Database | DNA repair | |
| GO:0006284 | IEA | GOA Database | base-excision repair | |
| GO:0043137 | IEA | GOA Database | DNA replication, removal of RNA primer | |
| GO:0090305 | IEA | GOA Database | nucleic acid phosphodiester bond hydrolysis |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048256 | ISO | PLAZA Integrative Orthology | flap endonuclease activity | AT5G26680 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | Os05g0540100 |
| GO:0017108 | IBA IEA | GOA Database | 5'-flap endonuclease activity | |
| GO:0008409 | IBA IEA | GOA Database | 5'-3' exonuclease activity | |
| GO:0016788 | IEA | GOA Database | hydrolase activity, acting on ester bonds | |
| GO:0003824 | IEA | GOA Database | catalytic activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0004518 | IEA | GOA Database | nuclease activity | |
| GO:0004518 | IEA | InterPro | nuclease activity | |
| GO:0004519 | IEA | GOA Database | endonuclease activity | |
| GO:0004527 | IEA | GOA Database | exonuclease activity | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0000287 | IEA | GOA Database | magnesium ion binding | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005730 | IEA | GOA Database | nucleolus | |
| GO:0005654 | IEA | GOA Database | nucleoplasm | |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005739 | IEA | GOA Database | mitochondrion |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |