Gene: Nitab4.5_0003511g0030

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0003511g0030
  • Transcript Identifier Nitab4.5_0003511g0030.1
  • Gene Type Coding gene
  • Location Nitab4.5_0003511 : 254722-268593 : positive

Gene Family Information

  • ID HOM05D003868
  • #Genes/#Species 180/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0003511g0030.1
  • SR1-identifier Nta02g28430.1

Descriptions

  • Description 5'-3' exonuclease, C-terminal domain, Helix-hairpin-helix motif, class 2, XPG N-terminal, 5'-3' exonuclease, N-terminal, XPG conserved site, XPG/Rad2 endonuclease, XPG-I domain, Flap structure-specific endonuclease
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009411
ISO
PLAZA Integrative Orthologyresponse to UV AT5G26680

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004518
IEA
InterPronuclease activity
GO:0003677
IEA
InterProDNA binding
GO:0003824
IEA
InterProcatalytic activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Os05g0540100
GO:0048256
ISO
PLAZA Integrative Orthologyflap endonuclease activity AT5G26680

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G26680
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus Os05g0540100

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006084 XPG/Rad2 endonuclease
IPR006085 XPG, N-terminal
IPR029060 PIN-like domain superfamily
IPR006086 XPG-I domain
IPR036279 5'-3' exonuclease, C-terminal domain superfamily
IPR002421 5'-3' exonuclease
IPR008918 Helix-hairpin-helix motif, class 2
Mapman id Description
13.2.4.2 Cell cycle organisation.DNA replication.maturation.flap structure-specific endonuclease (FEN1)
14.5.8 DNA damage response.base excision repair (BER).flap structure-specific endonuclease (FEN1)