Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p07770 Brassica napus
A03p33110 Brassica napus
A05p44340 Brassica napus
Aa31LG11G13220 Aethionema arabicum
Aa31LG5G13250 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2844 Anthoceros agrestis
Actinidia03293 Actinidia chinensis
Actinidia06803 Actinidia chinensis
Actinidia38903 Actinidia chinensis
Ah.04g158990 Amaranthus hybridus
Ah.06g195450 Amaranthus hybridus
AL3G12190 Arabidopsis lyrata
AL6G27370 Arabidopsis lyrata
Aqoxy2G04026 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7Y2C76 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BW88YF Arachis hypogaea
AT3G02780 Arabidopsis thaliana
AT5G16440 Arabidopsis thaliana
ATR1145G078 Amborella trichopoda
Atru.chr12.1779 Acer truncatum
AUR62000306 Chenopodium quinoa
AUR62006651 Chenopodium quinoa
BcaB04g19388 Brassica carinata
BcaB04g21400 Brassica carinata
BcaC05g30508 Brassica carinata
BcaC05g30511 Brassica carinata
BcaNung04309 Brassica carinata
BNapus_Darmor_BZH_scaffold_122p00260 Brassica napus
BNapus_Darmor_BZH_scaffold_122p00270 Brassica napus
BNapus_Darmor_BZH_scaffold_99p00290 Brassica napus
BolC1t05871H Brassica oleracea
BolC3t13395H Brassica oleracea
BolC3t16294H Brassica oleracea
BolC5t35067H Brassica oleracea
BraA01t04615Z Brassica rapa
BraA03t10104Z Brassica rapa
BraA03t12481Z Brassica rapa
BraA06t23290Z Brassica rapa
C03p08990 Brassica napus
C03p40290 Brassica napus
C05p21360 Brassica napus
C09p75900 Brassica napus
CAN.G217.10 Capsicum annuum
CAN.G694.23 Capsicum annuum
CAN.G694.24 Capsicum annuum
CARHR076790 Cardamine hirsuta
CARHR196820 Cardamine hirsuta
Carub.0003s0188 Capsella rubella
Carub.0006s1463 Capsella rubella
Ca_07990_v3 Cicer arietinum L.
CBR_g48525 Chara braunii
Cc09_g03670 Coffea canephora
CDE02G3521 Ceratophyllum demersum
CDE05G0693 Ceratophyllum demersum
CDE05G3592 Ceratophyllum demersum
CDE09G0057 Ceratophyllum demersum
Cfa006258 Carpinus fangiana
Ciclev10012312m.g Citrus clementina
CiPaw.07G080800 Carya illinoinensis
CiPaw.08G114800 Carya illinoinensis
ClCG03G010650 Citrullus lanatus
ClCG11G010680 Citrullus lanatus
COL.COLO4_38023 Corchorus olitorius
COL.COLO4_38024 Corchorus olitorius
Cpa.g.sc1105.3 Carica papaya
Cre11.g467544 Chlamydomonas reinhardtii
CsaV3_1G044500 Cucumis sativus L.
CsaV3_2G009720 Cucumis sativus L.
CSS0014154 Camellia sinensis var. sinensis
CSS0026150 Camellia sinensis var. sinensis
DCAR_015080 Daucus carota
Dinv10508 Davidia involucrata
Dinv29095 Davidia involucrata
Duzib128G1178 Durio zibethinus
Duzib177G0232 Durio zibethinus
ECA232G0651 Erigeron canadensis
ECA238G3407 Erigeron canadensis
EL10Ac4g09961 Beta vulgaris
Eucgr.A01783 Eucalyptus grandis
Eucgr.H01393 Eucalyptus grandis
FAN02G2831 Fragaria x ananassa
FAN05G4594 Fragaria x ananassa
FAN09G3800 Fragaria x ananassa
FAN14G0085 Fragaria x ananassa
FAN14G4609 Fragaria x ananassa
FvH4_6g00470 Fragaria vesca
FvH4_6g42310 Fragaria vesca
Glyma.09G250200 Glycine max
Glyma.18G242300 Glycine max
Gohir.A08G225900 Gossypium hirsutum
Gohir.D08G246300 Gossypium hirsutum
Gorai.004G262800 Gossypium raimondii
GSVIVG01019089001 Vitis vinifera
HanXRQChr04g0095031 Helianthus annuus
HanXRQChr09g0257801 Helianthus annuus
HanXRQChr09g0257811 Helianthus annuus
Haze_04560 Corylus avellana
Haze_26091 Corylus avellana
Lalb_Chr01g0020421 Lupinus albus
Lalb_Chr06g0168491 Lupinus albus
Lj1A574T25 Lonicera japonica
Lj1g0015068 Lotus japonicus
Lju50C0T2 Lonicera japonica
Lsat_1_v5_gn_2_17540 Lactuca sativa
Lsat_1_v5_gn_8_2340 Lactuca sativa
Manes.12G005500 Manihot esculenta
Manes.13G005300 Manihot esculenta
Mapoly0066s0080 Marchantia polymorpha
MBI07_g36332_MAGBIO Magnolia biondii
MBI11_g44548_MAGBIO Magnolia biondii
MCO12G260 Micromonas commoda
MD04G1245100 Malus domestica
MD12G1086800 Malus domestica
Medtr7g080060 Medicago truncatula
MELO3C008717.2 Cucumis melo
MELO3C010053.2 Cucumis melo
Migut.F01872 Erythranthe guttata
Migut.F02135 Erythranthe guttata
MSTRG.27390 Avicennia marina
MSTRG.329 Avicennia marina
MSTRG.8210 Avicennia marina
Nitab4.5_0000083g0120 Nicotiana tabacum
Nitab4.5_0000195g0040 Nicotiana tabacum
Nitab4.5_0000740g0050 Nicotiana tabacum
Nitab4.5_0000971g0070 Nicotiana tabacum
Nitab4.5_0001435g0050 Nicotiana tabacum
Nitab4.5_0003099g0070 Nicotiana tabacum
Nn7g38203 Nelumbo nucifera
Oeu023172.1 Olea europaea
Oeu046895.1 Olea europaea
Os05g0413400 Oryza sativa ssp. japonica
Os07g0546000 Oryza sativa ssp. japonica
Peaxi162Scf00048g00815 Petunia axillaris
Peaxi162Scf00156g00114 Petunia axillaris
PGR031G1622 Punica granatum
PGR119G0297 Punica granatum
PGSC0003DMG400007268 Solanum tuberosum
PGSC0003DMG400012082 Solanum tuberosum
PGSC0003DMG400023359 Solanum tuberosum
Phvul.008G054025 Phaseolus vulgaris
Potri.019G053700 Populus trichocarpa
Pp3c1_33430 Physcomitrium patens
PRCOL_00001613 Prasinoderma coloniale
Prupe.6G361700 Prunus persica
Psat3g138120 Pisum sativum
PSO017G2843 Papaver somniferum
PSO170G0032 Papaver somniferum
PSO357G0181 Papaver somniferum
PSO675G7217 Papaver somniferum
QL08p020626 Quercus lobata
RcHm_v2.0_Chr3g0447851 Rosa chinensis
Rhsim09G0130100 Rhododendron simsii
Sabra19G0062900 Salix brachista
Sc09g0001450 Simmondsia chinensis
Sed0006377 Sechium edule
Sed0012073 Sechium edule
SEGI_07465 Sequoiadendron giganteum
SGA_v2.0_scaffold340G49303 Striga asiatica
SGA_v2.0_scaffold62G21505 Striga asiatica
SMO367G0306 Selaginella moellendorffii
Solyc04g056390.3 Solanum lycopersicum
Solyc05g055760.3 Solanum lycopersicum
Sopen04g025300 Solanum pennellii
Sopen05g034170 Solanum pennellii
Sp3g01810 Schrenkiella parvula
Sp6g27750 Schrenkiella parvula
TAR365G0109 Trochodendron aralioides
TAR636G3604 Trochodendron aralioides
THA.LOC104802955 Tarenaya hassleriana
THA.LOC104820922 Tarenaya hassleriana
Thecc.05G194400 Theobroma cacao
Thhalv10014571m.g Eutrema salsugineum
Thhalv10020933m.g Eutrema salsugineum
TPR.G31802 Trifolium pratense
TWI18G1194 Tripterygium wilfordii
TWI75G1224 Tripterygium wilfordii
unitig_61.g26276 Utricularia gibba
vmacro10405 Vaccinium macrocarpon
VMungo1383G1495 Vigna mungo
Zm00001eb288110 Zea mays
Zm00001eb323510 Zea mays
Zm00001eb349410 Zea mays

User provided reference genes

Program Settings