Gene: Solyc04g056390.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g056390.3
  • Transcript Identifier Solyc04g056390.3.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 53482478-53485782 : negative

Gene Family Information

  • ID HOM05D003800
  • #Genes/#Species 182/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g056390.3.1
  • uniprot A0A3Q7GXR4
  • gene_id Solyc04g056390

Descriptions

  • Description Isopentenyl-diphosphate Delta-isomerase (AHRD V3.3 *** A0A2L0V4K4_9APIA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008299
IEA
GOA Databaseisoprenoid biosynthetic process
GO:0008299
IEA
InterProisoprenoid biosynthetic process
GO:0015995
IEA
GOA Databasechlorophyll biosynthetic process
GO:0050992
IEA
GOA Databasedimethylallyl diphosphate biosynthetic process
GO:0009240
IBA
GOA Databaseisopentenyl diphosphate biosynthetic process
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT3G02780

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004452
IBA
IEA
GOA Databaseisopentenyl-diphosphate delta-isomerase activity
GO:0004452
IEA
InterProisopentenyl-diphosphate delta-isomerase activity
GO:0016853
IEA
GOA Databaseisomerase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
GOA Databasecytoplasm
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G02780
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G02780
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G02780
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT5G16440

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000086 NUDIX hydrolase domain
IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1
IPR015797 NUDIX hydrolase-like domain superfamily
Mapman id Description
9.1.1.7 Secondary metabolism.terpenoids.mevalonate pathway.isopentenyl diphosphate isomerase