Gene: AT3G02780

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G02780
  • Transcript Identifier AT3G02780.1
  • Gene Type Coding gene
  • Location Chr3 : 602578-604648 : negative

Gene Family Information

  • ID HOM05D003800
  • #Genes/#Species 182/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G02780.1
  • symbol IPP2
  • Alias IDI2,ATISOPENTENYL DIPHOSPHE ISOMERASE 2,IPIAT1
  • uniprot Q42553

Descriptions

  • Description isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2
  • Computational description isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2 (IPP2); FUNCTIONS IN: isopentenyl-diphosphate delta-isomerase activity; INVOLVED IN: chlorophyll biosynthetic process, flower development, isoprenoid biosynthetic process; LOCATED IN: cytosol, mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086), Isopentenyl-diphosphate delta-isomerase, type 1 (InterPro:IPR011876); BEST Arabidopsis thaliana protein match is: isopentenyl diphosphate isomerase 1 (TAIR:AT5G16440.1); Has 2187 Blast hits to 2186 proteins in 784 species: Archae - 35; Bacteria - 1163; Metazoa - 210; Fungi - 137; Plants - 180; Viruses - 0; Other Eukaryotes - 462 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008299
IEA
GOA Databaseisoprenoid biosynthetic process
GO:0008299
TAS
Gene Ontologyisoprenoid biosynthetic process1
GO:0008299
IEA
InterProisoprenoid biosynthetic process
GO:0015979
IEA
GOA Databasephotosynthesis
GO:0009240
IBA
Gene Ontologyisopentenyl diphosphate biosynthetic process2
GO:0015995
TAS, IEA
Gene Ontologychlorophyll biosynthetic process1
GO:0009908
IMP
Gene Ontologyflower development3
GO:0050992
IEA
Gene Ontologydimethylallyl diphosphate biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004452
IDA
IBA
IEA
Gene Ontologyisopentenyl-diphosphate delta-isomerase activity1 2
GO:0004452
IEA
InterProisopentenyl-diphosphate delta-isomerase activity
GO:0016853
IEA
GOA Databaseisomerase activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009536
IEA
GOA Databaseplastid
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast4
GO:0005737
IBA
Gene Ontologycytoplasm2
GO:0005739
IDA, HDA
Gene Ontologymitochondrion3 5
GO:0005829
IDA
Gene Ontologycytosol3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000086 NUDIX hydrolase domain
IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1
IPR015797 NUDIX hydrolase-like domain superfamily
Mapman id Description
9.1.1.7 Secondary metabolism.terpenoids.mevalonate pathway.isopentenyl diphosphate isomerase