Gene: Sopen04g025300

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g025300
  • Transcript Identifier Sopen04g025300.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 65911583-65915164 : negative

Gene Family Information

  • ID HOM05D003800
  • #Genes/#Species 182/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g025300.1

Descriptions

  • Description Encodes a protein with isopentenyl diphosphate:dimethylallyl diphosphate isomerase activity. There is genetic evidence that it functions in the mevalonate, but not the MEP biosynthetic pathway. | isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2 (IPP2) | FUNCTIONS IN: isopentenyl-diphosphate delta-isomerase activity | INVOLVED IN: chlorophyll biosynthetic process, flower development, isoprenoid biosynthetic process | LOCATED IN: cytosol, mitochondrion, chloroplast | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like , NUDIX hydrolase domain , Isopentenyl-diphosphate delta-isomerase, type 1 | BEST Arabidopsis thaliana protein match is: isopentenyl diphosphate isomerase 1
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008299
IEA
InterProisoprenoid biosynthetic process
GO:0015995
ISO
PLAZA Integrative Orthologychlorophyll biosynthetic process AT3G02780
GO:0009240
ISO
PLAZA Integrative Orthologyisopentenyl diphosphate biosynthetic process AT5G16440
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT3G02780

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004452
IEA
InterProisopentenyl-diphosphate delta-isomerase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G02780
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G02780
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G02780
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT5G16440

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015797 NUDIX hydrolase-like domain superfamily
IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1
IPR000086 NUDIX hydrolase domain
Mapman id Description
9.1.1.7 Secondary metabolism.terpenoids.mevalonate pathway.isopentenyl diphosphate isomerase