Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p06860 Brassica napus
A04p16990 Brassica napus
A04p18800 Brassica napus
A09p56240 Brassica napus
Aa31LG2G18930 Aethionema arabicum
Aa31LG7G11470 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5550 Anthoceros agrestis
Actinidia03577 Actinidia chinensis
Actinidia14145 Actinidia chinensis
Ah.06g192800 Amaranthus hybridus
AL4G14980 Arabidopsis lyrata
AL7G20640 Arabidopsis lyrata
Aqoxy7G03011 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DFD6U9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P9WJGS Arachis hypogaea
AT2G24500 Arabidopsis thaliana
AT4G31420 Arabidopsis thaliana
ATR0580G292 Amborella trichopoda
Atru.chr7.2631 Acer truncatum
AUR62009050 Chenopodium quinoa
AUR62020613 Chenopodium quinoa
BcaB03g16788 Brassica carinata
BcaB06g27975 Brassica carinata
BcaC01g05020 Brassica carinata
BcaC02g08448 Brassica carinata
BcaC05g27745 Brassica carinata
BcaC06g31298 Brassica carinata
BcaC07g37410 Brassica carinata
BcaC07g40924 Brassica carinata
BcaC09g48197 Brassica carinata
BcaC09g48198 Brassica carinata
BcaC09g51921 Brassica carinata
BcaNung04590 Brassica carinata
BolC1t00743H Brassica oleracea
BolC1t05292H Brassica oleracea
BolC4t26963H Brassica oleracea
BolC5t33423H Brassica oleracea
BolC8t47735H Brassica oleracea
BolC8t51492H Brassica oleracea
BraA01t00637Z Brassica rapa
BraA04t17489Z Brassica rapa
BraA09t41018Z Brassica rapa
C01p07630 Brassica napus
C03p31060 Brassica napus
C04p54110 Brassica napus
C05p37300 Brassica napus
C05p46930 Brassica napus
C08p08900 Brassica napus
C08p39190 Brassica napus
CAN.G4.3 Capsicum annuum
CAN.G566.61 Capsicum annuum
CAN.G673.15 Capsicum annuum
CANSAT11G2609 Cannabis sativa
CANSAT25G1292 Cannabis sativa
CARHR117530 Cardamine hirsuta
CARHR239300 Cardamine hirsuta
Carub.0004s0384 Capsella rubella
Carub.0007s0914 Capsella rubella
Ca_12869_v3 Cicer arietinum L.
CBR_g30359 Chara braunii
Cc08_g06430 Coffea canephora
Cc08_g06510 Coffea canephora
CDE02G2639 Ceratophyllum demersum
CDE05G1087 Ceratophyllum demersum
CDE05G3053 Ceratophyllum demersum
Cfa013262 Carpinus fangiana
Cfa024431 Carpinus fangiana
Cfa025296 Carpinus fangiana
Ciclev10008476m.g Citrus clementina
CiPaw.07G213700 Carya illinoinensis
CiPaw.08G019100 Carya illinoinensis
ClCG05G017500 Citrullus lanatus
COL.COLO4_19043 Corchorus olitorius
Cpa.g.sc23.4 Carica papaya
Cre17.g716400 Chlamydomonas reinhardtii
CsaV3_3G047000 Cucumis sativus L.
CSS0027905 Camellia sinensis var. sinensis
DCAR_000669 Daucus carota
Dinv03491 Davidia involucrata
Dinv18146 Davidia involucrata
Duzib168G2376 Durio zibethinus
ECA233G0490 Erigeron canadensis
ECA233G4849 Erigeron canadensis
ECA246G0440 Erigeron canadensis
EL10Ac2g03738 Beta vulgaris
Eucgr.C04005 Eucalyptus grandis
FAN15G2333 Fragaria x ananassa
FAN20G0096 Fragaria x ananassa
FAN27G1333 Fragaria x ananassa
FvH4_2g36910 Fragaria vesca
Glyma.11G172610 Glycine max
Glyma.11G172819 Glycine max
Glyma.17G189600 Glycine max
Glyma.17G200200 Glycine max
Gohir.A05G065000 Gossypium hirsutum
Gohir.A07G001400 Gossypium hirsutum
Gohir.D05G067600 Gossypium hirsutum
Gohir.D07G001800 Gossypium hirsutum
Gorai.001G001500 Gossypium raimondii
Gorai.009G068400 Gossypium raimondii
GSVIVG01035534001 Vitis vinifera
HanXRQChr12g0384061 Helianthus annuus
HanXRQChr16g0504351 Helianthus annuus
HanXRQChr16g0513211 Helianthus annuus
Haze_21723 Corylus avellana
Hma1.2p1_0379F.1_g139790 Hydrangea macrophylla
Hma1.2p1_0891F.1_g233175 Hydrangea macrophylla
HPP92_010767 Vanilla planifolia
Hund03284 Selenicereus undatus
Lalb_Chr14g0362261 Lupinus albus
Lalb_Chr24g0402471 Lupinus albus
Lj5g0015114 Lotus japonicus
Lj7A752T54 Lonicera japonica
Lsat_1_v5_gn_3_27981 Lactuca sativa
Lsat_1_v5_gn_6_15381 Lactuca sativa
Manes.03G003200 Manihot esculenta
Manes.16G136200 Manihot esculenta
Mapoly0085s0044 Marchantia polymorpha
MBI16_g31785_MAGBIO Magnolia biondii
MCO10G355 Micromonas commoda
MCO14G546 Micromonas commoda
MD08G1131000 Malus domestica
MD15G1108800 Malus domestica
Medtr1g009770 Medicago truncatula
Medtr1g047010 Medicago truncatula
Medtr5g061270 Medicago truncatula
MELO3C003636.2 Cucumis melo
Migut.A00439 Erythranthe guttata
MSTRG.25776 Avicennia marina
Nitab4.5_0000555g0240 Nicotiana tabacum
Nitab4.5_0001110g0180 Nicotiana tabacum
Nitab4.5_0004131g0030 Nicotiana tabacum
Nitab4.5_0005481g0010 Nicotiana tabacum
Nn8g40427 Nelumbo nucifera
Oeu018570.1 Olea europaea
Oeu040383.1 Olea europaea
Os06g0693500 Oryza sativa ssp. japonica
Os06g0693600 Oryza sativa ssp. japonica
Peaxi162Scf00045g01736 Petunia axillaris
Peaxi162Scf00459g00837 Petunia axillaris
PGR044G2213 Punica granatum
PGSC0003DMG400029367 Solanum tuberosum
PGSC0003DMG401026315 Solanum tuberosum
Phvul.001G058800 Phaseolus vulgaris
Potri.006G275300 Populus trichocarpa
Potri.018G006300 Populus trichocarpa
Pp3c14_26000 Physcomitrium patens
Pp3c17_19500 Physcomitrium patens
Pp3c2_4670 Physcomitrium patens
PRCOL_00002050 Prasinoderma coloniale
Prupe.1G461000 Prunus persica
Psat6g032480 Pisum sativum
PSO063G6534 Papaver somniferum
PSO170G4284 Papaver somniferum
QL12p024946 Quercus lobata
RcHm_v2.0_Chr6g0304871 Rosa chinensis
Rhsim07G0170500 Rhododendron simsii
Sabra06G0213100 Salix brachista
SalBow4G1160 Salvia bowleyana
Sc09g0008090 Simmondsia chinensis
Sed0004467 Sechium edule
Sed0010708 Sechium edule
SEGI_16726 Sequoiadendron giganteum
SGA_v2.0_scaffold193G40661 Striga asiatica
SHI21127 Sapria himalayana
SMO143G0266 Selaginella moellendorffii
Solyc08g006470.4 Solanum lycopersicum
Solyc12g096450.2 Solanum lycopersicum
Sopen08g002420 Solanum pennellii
Sopen12g032280 Solanum pennellii
Sp4g03510 Schrenkiella parvula
Sp7g29280 Schrenkiella parvula
TAR383G0188 Trochodendron aralioides
TAR383G0531 Trochodendron aralioides
TAR383G1077 Trochodendron aralioides
TAR626G0756 Trochodendron aralioides
TAR626G0897 Trochodendron aralioides
THA.LOC104803597 Tarenaya hassleriana
Thecc.09G006300 Theobroma cacao
Thhalv10000189m.g Eutrema salsugineum
Thhalv10025366m.g Eutrema salsugineum
TPR.G12018 Trifolium pratense
TWI63G1033 Tripterygium wilfordii
unitig_32.g11644 Utricularia gibba
vmacro05102 Vaccinium macrocarpon
VMungo0647G0546 Vigna mungo
Zm00001eb226230 Zea mays

User provided reference genes

Program Settings