Gene: Cc08_g06430
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc08_g06430
- Transcript Identifier Cc08_g06430.1
- Gene Type Coding gene
- Location chr8 : 15006636-15010721 : negative
Gene Family Information
- ID HOM05D003678
- #Genes/#Species 187/100
- Phylogenetic origin
- ID ORTHO05D004340
- #Genes/#Species 183/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- UniProtKB D9ZIU1
- UniProtKB Q91VY9
- UniProtKB Q969S3
- UniProtKB B9SPP4
- UniProtKB O59811
- UniProtKB F6H3B4
- id GSCOCG00036029001
Descriptions
- Description Putative Zinc finger protein 622
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0042273 | ISO | PLAZA Integrative Orthology | ribosomal large subunit biogenesis | AT2G24500 |
GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT2G24500 |
GO:0009631 | ISO | PLAZA Integrative Orthology | cold acclimation | AT2G24500 |
GO:0006364 | ISO | PLAZA Integrative Orthology | rRNA processing | AT2G24500 |
GO:0090070 | ISO | PLAZA Integrative Orthology | positive regulation of ribosome biogenesis | AT2G24500 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003676 | IEA | InterPro | nucleic acid binding | |
GO:0008270 | IEA | InterPro | zinc ion binding | |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G24500 |
GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT2G24500 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G24500 |
GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT2G24500 |
GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G24500 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
17.1.2.2.3.2 | Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.60S ribosomal subunit cytoplasmic maturation.maturation factor (REIL) |