Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p14500 Brassica napus
A07p20760 Brassica napus
Aa31LG5G13590 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2338 Anthoceros agrestis
Actinidia14580 Actinidia chinensis
Actinidia28364 Actinidia chinensis
Ah.12g058870 Amaranthus hybridus
AL7G48050 Arabidopsis lyrata
AL7G48070 Arabidopsis lyrata
Aqoxy1G00680 Aquilegia oxysepala
Aqoxy5G02024 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5RI6ER Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.75Q964 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U109MR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZIDD3N Arachis hypogaea
AT5G41360 Arabidopsis thaliana
AT5G41370 Arabidopsis thaliana
ATR0661G194 Amborella trichopoda
Atru.chr9.2153 Acer truncatum
AUR62004519 Chenopodium quinoa
AUR62006323 Chenopodium quinoa
AUR62010445 Chenopodium quinoa
AUR62022736 Chenopodium quinoa
AUR62030470 Chenopodium quinoa
BcaB02g07896 Brassica carinata
BcaB06g27616 Brassica carinata
BcaC02g08964 Brassica carinata
BcaC08g44523 Brassica carinata
BcaC08g44524 Brassica carinata
BolC4t26434H Brassica oleracea
BolC6t37162H Brassica oleracea
BolC6t37163H Brassica oleracea
BolC6t37164H Brassica oleracea
BraA04t17095Z Brassica rapa
BraA07t29768Z Brassica rapa
C04p48400 Brassica napus
C06p19750 Brassica napus
CAN.G532.8 Capsicum annuum
CANSAT25G0732 Cannabis sativa
CARHR183180 Cardamine hirsuta
CARHR212960 Cardamine hirsuta
Carub.0007s3411 Capsella rubella
Carub.0007s3412 Capsella rubella
Ca_10937_v3 Cicer arietinum L.
CBR_g34305 Chara braunii
Cc08_g15010 Coffea canephora
CDE04G1391 Ceratophyllum demersum
CDE12G0607 Ceratophyllum demersum
Cfa012202 Carpinus fangiana
Cfa023957 Carpinus fangiana
Ciclev10019088m.g Citrus clementina
CiPaw.12G091100 Carya illinoinensis
ClCG01G002520 Citrullus lanatus
COL.COLO4_31600 Corchorus olitorius
COL.COLO4_34498 Corchorus olitorius
Cpa.g.sc180.13 Carica papaya
Cre06.g297016 Chlamydomonas reinhardtii
CsaV3_5G002620 Cucumis sativus L.
CSS0029160 Camellia sinensis var. sinensis
CSS0043381 Camellia sinensis var. sinensis
DCAR_005566 Daucus carota
Dinv37619 Davidia involucrata
Dinv38921 Davidia involucrata
Duzib084G0223 Durio zibethinus
Duzib205G0291 Durio zibethinus
ECA246G1863 Erigeron canadensis
ECA246G2088 Erigeron canadensis
EL10Ac5g12531 Beta vulgaris
Eucgr.E00638 Eucalyptus grandis
FAN01G0379 Fragaria x ananassa
FAN01G2616 Fragaria x ananassa
FAN02G3608 Fragaria x ananassa
FAN03G2549 Fragaria x ananassa
FAN04G2533 Fragaria x ananassa
FAN04G2979 Fragaria x ananassa
FAN06G0185 Fragaria x ananassa
FAN06G2516 Fragaria x ananassa
FAN06G4150 Fragaria x ananassa
FAN08G0848 Fragaria x ananassa
FAN08G2634 Fragaria x ananassa
FAN10G3500 Fragaria x ananassa
FAN13G0171 Fragaria x ananassa
FAN13G0786 Fragaria x ananassa
FAN18G3267 Fragaria x ananassa
FAN18G4545 Fragaria x ananassa
FvH4_5g02840 Fragaria vesca
FvH4_5g19420 Fragaria vesca
FvH4_5g19430 Fragaria vesca
FvH4_7g07850 Fragaria vesca
FvH4_7g08220 Fragaria vesca
Glyma.05G209700 Glycine max
Glyma.08G016400 Glycine max
Glyma.08G323500 Glycine max
Glyma.18G257500 Glycine max
Gohir.A01G154260 Gossypium hirsutum
Gohir.A03G019400 Gossypium hirsutum
Gohir.A08G056801 Gossypium hirsutum
Gohir.A08G111101 Gossypium hirsutum
Gohir.A08G111200 Gossypium hirsutum
Gohir.A11G022800 Gossypium hirsutum
Gohir.D03G149600 Gossypium hirsutum
Gohir.D11G022333 Gossypium hirsutum
Gohir.D11G022366 Gossypium hirsutum
Gorai.003G156900 Gossypium raimondii
Gorai.007G023800 Gossypium raimondii
GSVIVG01019392001 Vitis vinifera
HanXRQChr06g0165951 Helianthus annuus
HanXRQChr17g0533461 Helianthus annuus
Haze_08814 Corylus avellana
Haze_26458 Corylus avellana
HPP92_021979 Vanilla planifolia
HPP92_022012 Vanilla planifolia
Hund10975 Selenicereus undatus
Lalb_Chr05g0224631 Lupinus albus
Lalb_Chr16g0390181 Lupinus albus
Lj2C182G1 Lonicera japonica
Lj4g0015025 Lotus japonicus
Lj8A218G25 Lonicera japonica
Lsat_1_v5_gn_2_120581 Lactuca sativa
Lsat_1_v5_gn_2_120601 Lactuca sativa
Lsat_1_v5_gn_3_6121 Lactuca sativa
Lsat_1_v5_gn_7_95160 Lactuca sativa
Manes.02G021700 Manihot esculenta
Mapoly0037s0100 Marchantia polymorpha
MBI04_g35068_MAGBIO Magnolia biondii
MBI04_g41820_MAGBIO Magnolia biondii
MCO01G486 Micromonas commoda
MD06G1087900 Malus domestica
Medtr8g098675 Medicago truncatula
MELO3C005694.2 Cucumis melo
Migut.E01191 Erythranthe guttata
MSTRG.11971 Avicennia marina
Nitab4.5_0001220g0100 Nicotiana tabacum
Nitab4.5_0001522g0040 Nicotiana tabacum
Nitab4.5_0002290g0010 Nicotiana tabacum
Nitab4.5_0004008g0010 Nicotiana tabacum
Nitab4.5_0004114g0020 Nicotiana tabacum
Nn6g33339 Nelumbo nucifera
Oeu030097.4 Olea europaea
Os01g0691600 Oryza sativa ssp. japonica
Peaxi162Scf00074g02032 Petunia axillaris
PGR042G0359 Punica granatum
PGSC0003DMG400012332 Solanum tuberosum
PGSC0003DMG400026783 Solanum tuberosum
Phvul.002G291500 Phaseolus vulgaris
Potri.001G101300 Populus trichocarpa
Pp3c6_13890 Physcomitrium patens
PRCOL_00001151 Prasinoderma coloniale
Prupe.5G104000 Prunus persica
Psat7g031680 Pisum sativum
PSO017G3334 Papaver somniferum
PSO421G0274 Papaver somniferum
PSO478G5020 Papaver somniferum
QL02p047919 Quercus lobata
QL02p047967 Quercus lobata
QL12p032410 Quercus lobata
RcHm_v2.0_Chr1g0341611 Rosa chinensis
RcHm_v2.0_Chr1g0341621 Rosa chinensis
RcHm_v2.0_Chr1g0341861 Rosa chinensis
RcHm_v2.0_Chr7g0197061 Rosa chinensis
RcHm_v2.0_Chr7g0203931 Rosa chinensis
Rhsim02G0234100 Rhododendron simsii
Rhsim07G0088600 Rhododendron simsii
Sabra01G0076300 Salix brachista
SalBow1G4213 Salvia bowleyana
SalBow1G5824 Salvia bowleyana
Sc07g0009820 Simmondsia chinensis
Sed0019074 Sechium edule
SEGI_12688 Sequoiadendron giganteum
SEGI_12778 Sequoiadendron giganteum
SEGI_31025 Sequoiadendron giganteum
SEGI_31932 Sequoiadendron giganteum
SEGI_39024 Sequoiadendron giganteum
SGA_v2.0_scaffold144G35916 Striga asiatica
SHI07186 Sapria himalayana
SMO115G0114 Selaginella moellendorffii
SMO115G0252 Selaginella moellendorffii
SMO163G0061 Selaginella moellendorffii
SMO166G0028 Selaginella moellendorffii
SMO347G0324 Selaginella moellendorffii
Solyc08g081340.4 Solanum lycopersicum
Sopen08g029660 Solanum pennellii
Sp7g00580 Schrenkiella parvula
SpUn0010_0060 Schrenkiella parvula
TAR636G0201 Trochodendron aralioides
THA.LOC104817891 Tarenaya hassleriana
Thecc.03G282800 Theobroma cacao
Thhalv10027651m.g Eutrema salsugineum
TPR.G12826 Trifolium pratense
TPR.G33074 Trifolium pratense
TWI15G1061 Tripterygium wilfordii
TWI15G1203 Tripterygium wilfordii
TWI81G0502 Tripterygium wilfordii
unitig_62.g23537 Utricularia gibba
unitig_62.g23538 Utricularia gibba
vmacro11393 Vaccinium macrocarpon
VMungo0251G2080 Vigna mungo
Zm00001eb156220 Zea mays

User provided reference genes

Program Settings