Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p44550 Brassica napus
Aa31LG5G10560 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2302 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4331 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4332 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4419 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4424 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.838 Anthoceros agrestis
Actinidia06029 Actinidia chinensis
Actinidia13514 Actinidia chinensis
Actinidia15041 Actinidia chinensis
Actinidia15042 Actinidia chinensis
Ah.16g106640 Amaranthus hybridus
AL3G10710 Arabidopsis lyrata
Aqoxy3G00985 Aquilegia oxysepala
Aqoxy3G02993 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.50RNEG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S45US4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YCXM3R Arachis hypogaea
AT3G01460 Arabidopsis thaliana
ATR0691G050 Amborella trichopoda
Atru.chr11.2012 Acer truncatum
Atru.chr6.2192 Acer truncatum
AUR62032109 Chenopodium quinoa
AUR62042408 Chenopodium quinoa
BcaB04g21418 Brassica carinata
BcaC09g47659 Brassica carinata
BNapus_Darmor_BZH_scaffold_119p00030 Brassica napus
BNapus_Darmor_BZH_scaffold_133p00020 Brassica napus
BNapus_Darmor_BZH_scaffold_97p00400 Brassica napus
BolC1t05958H Brassica oleracea
BolC5t35150H Brassica oleracea
BraA01t04666Z Brassica rapa
BraA05t23202Z Brassica rapa
C09p75140 Brassica napus
CAN.G1420.2 Capsicum annuum
CAN.G58.32 Capsicum annuum
CANSAT64G0328 Cannabis sativa
CARHR075500 Cardamine hirsuta
Carub.0001s0467 Capsella rubella
Carub.0001s0468 Capsella rubella
Carub.0003s0064 Capsella rubella
Ca_04206_v3 Cicer arietinum L.
CBR_g24400 Chara braunii
Cc11_g14600 Coffea canephora
CDE10G0339 Ceratophyllum demersum
Cfa007435 Carpinus fangiana
Cfa009137 Carpinus fangiana
Ciclev10014026m.g Citrus clementina
Ciclev10030471m.g Citrus clementina
CiPaw.03G037100 Carya illinoinensis
CiPaw.04G024200 Carya illinoinensis
ClCG10G014330 Citrullus lanatus
COL.COLO4_28936 Corchorus olitorius
Cpa.g.sc215.4 Carica papaya
Cpa.g.sc215.7 Carica papaya
CsaV3_3G042270 Cucumis sativus L.
CSS0016548 Camellia sinensis var. sinensis
CSS0024289 Camellia sinensis var. sinensis
CSS0024625 Camellia sinensis var. sinensis
CSS0027613 Camellia sinensis var. sinensis
CSS0032060 Camellia sinensis var. sinensis
DCAR_007093 Daucus carota
DCAR_021679 Daucus carota
DCAR_031098 Daucus carota
Dinv15308 Davidia involucrata
Dinv24865 Davidia involucrata
Dinv33502 Davidia involucrata
Dinv35052 Davidia involucrata
Dinv35053 Davidia involucrata
Duzib147G1510 Durio zibethinus
ECA199G0003 Erigeron canadensis
ECA199G0007 Erigeron canadensis
ECA232G4683 Erigeron canadensis
ECA233G2073 Erigeron canadensis
EL10Ac2g03352 Beta vulgaris
EL10As3g23304 Beta vulgaris
Eucgr.I01818 Eucalyptus grandis
FAN02G2799 Fragaria x ananassa
FAN05G2549 Fragaria x ananassa
FAN09G2719 Fragaria x ananassa
FAN09G4608 Fragaria x ananassa
FAN14G1908 Fragaria x ananassa
FAN14G4206 Fragaria x ananassa
FvH4_6g50560 Fragaria vesca
Glyma.13G170000 Glycine max
Glyma.19G010200 Glycine max
Gohir.A09G026000 Gossypium hirsutum
Gohir.D09G025300 Gossypium hirsutum
Gorai.006G029600 Gossypium raimondii
GSVIVG01012339001 Vitis vinifera
GSVIVG01020232001 Vitis vinifera
GSVIVG01032492001 Vitis vinifera
HanXRQChr09g0266041 Helianthus annuus
HanXRQChr12g0368561 Helianthus annuus
HanXRQChr17g0569791 Helianthus annuus
Haze_12169 Corylus avellana
Haze_14661 Corylus avellana
Hma1.2p1_0802F.1_g220440 Hydrangea macrophylla
Hma1.2p1_0802F.1_g220460 Hydrangea macrophylla
HPP92_008854 Vanilla planifolia
Hund12469 Selenicereus undatus
Lalb_Chr02g0160031 Lupinus albus
Lalb_Chr02g0160041 Lupinus albus
Lalb_Chr02g0160051 Lupinus albus
Lalb_Chr02g0160231 Lupinus albus
Lalb_Chr02g0160241 Lupinus albus
Lalb_Chr06g0176091 Lupinus albus
Lalb_Chr14g0362801 Lupinus albus
Lalb_Chr14g0362821 Lupinus albus
Lalb_Chr21g0319411 Lupinus albus
Lj2g0012220 Lotus japonicus
Lj6C805G5 Lonicera japonica
Lj7A591T75 Lonicera japonica
Lj7C591T5 Lonicera japonica
Lsat_1_v5_gn_4_181201 Lactuca sativa
Lsat_1_v5_gn_4_181221 Lactuca sativa
Lsat_1_v5_gn_4_181301 Lactuca sativa
Lsat_1_v5_gn_4_182141 Lactuca sativa
Lsat_1_v5_gn_4_182161 Lactuca sativa
Lsat_1_v5_gn_4_6960 Lactuca sativa
Lsat_1_v5_gn_8_143280 Lactuca sativa
Lsat_1_v5_gn_8_143300 Lactuca sativa
Lsat_1_v5_gn_8_157680 Lactuca sativa
Lsat_1_v5_gn_8_93580 Lactuca sativa
Manes.12G029600 Manihot esculenta
Manes.15G182800 Manihot esculenta
Mapoly0064s0056 Marchantia polymorpha
MCO03G197 Micromonas commoda
MD09G1035200 Malus domestica
MD17G1035500 Malus domestica
Medtr6g007650 Medicago truncatula
MELO3C009946.2 Cucumis melo
Migut.H00129 Erythranthe guttata
Migut.H00131 Erythranthe guttata
Migut.H00132 Erythranthe guttata
Migut.I00146 Erythranthe guttata
Migut.L01407 Erythranthe guttata
MSTRG.7892 Avicennia marina
Nitab4.5_0000113g0210 Nicotiana tabacum
Nitab4.5_0002579g0080 Nicotiana tabacum
Nn2g15375 Nelumbo nucifera
Nn3g16906 Nelumbo nucifera
Nn4g22008 Nelumbo nucifera
Nn4g22811 Nelumbo nucifera
Nn4g22812 Nelumbo nucifera
Oeu003445.1 Olea europaea
Oeu056394.4 Olea europaea
Os02g0192300 Oryza sativa ssp. japonica
Os02g0192400 Oryza sativa ssp. japonica
Peaxi162Scf00338g00002 Petunia axillaris
PGR142G1415 Punica granatum
Phvul.004G017600 Phaseolus vulgaris
Potri.017G072460 Populus trichocarpa
Potri.017G072580 Populus trichocarpa
Pp3c1_860 Physcomitrium patens
Pp3c2_35750 Physcomitrium patens
Pp3c5_19640 Physcomitrium patens
Pp3c6_8120 Physcomitrium patens
PRCOL_00000887 Prasinoderma coloniale
PRCOL_00006361 Prasinoderma coloniale
Prupe.3G283100 Prunus persica
Psat0s1953g0200 Pisum sativum
Psat0s8568g0080 Pisum sativum
Psat1g059480 Pisum sativum
PSO063G6215 Papaver somniferum
PSO832G1186 Papaver somniferum
QL02p076799 Quercus lobata
QL03p061451 Quercus lobata
QL05p070069 Quercus lobata
RcHm_v2.0_Chr2g0171081 Rosa chinensis
Rhsim10G0023100 Rhododendron simsii
Rhsim12G0121100 Rhododendron simsii
Sabra17G0060500 Salix brachista
Sc06g0000060 Simmondsia chinensis
Sc06g0001590 Simmondsia chinensis
Sc06g0001600 Simmondsia chinensis
Sed0022584 Sechium edule
SEGI_10619 Sequoiadendron giganteum
SEGI_35053 Sequoiadendron giganteum
SGA_v2.0_scaffold165G38252 Striga asiatica
SHI25550 Sapria himalayana
SHI25551 Sapria himalayana
SHI25555 Sapria himalayana
Sopen05g001650 Solanum pennellii
Sp3g00610 Schrenkiella parvula
TAR371G0580 Trochodendron aralioides
TAR629G0276 Trochodendron aralioides
THA.LOC104822384 Tarenaya hassleriana
Thecc.04G008000 Theobroma cacao
Thhalv10019872m.g Eutrema salsugineum
Thhalv10022520m.g Eutrema salsugineum
TPR.G2281 Trifolium pratense
TPR.G2296 Trifolium pratense
TWI12G0214 Tripterygium wilfordii
TWI36G0997 Tripterygium wilfordii
unitig_26.g10338 Utricularia gibba
unitig_26.g10339 Utricularia gibba
vmacro05815 Vaccinium macrocarpon
vmacro05816 Vaccinium macrocarpon
vmacro16257 Vaccinium macrocarpon
VMungo0464G0152 Vigna mungo
VMungo0464G0255 Vigna mungo
Zm00001eb206240 Zea mays

User provided reference genes

Program Settings