Gene: BNapus_Darmor_BZH_scaffold_119p00030
General Information
Structural Information
- Species Brassica napus
- Gene Identifier BNapus_Darmor_BZH_scaffold_119p00030
- Transcript Identifier BNapus_Darmor_BZH_scaffold_119p00030
- Gene Type Coding gene
- Location BNapus_Darmor_BZH_scaffold_119 : 111785-117699 : negative
Gene Family Information
- ID HOM05D003353
- #Genes/#Species 204/94
- Phylogenetic origin
- ID ORTHO05D003751
- #Genes/#Species 207/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid BNapus_Darmor_BZH_scaffold_119p00030.1_BnaDAR
- single_cell_id BNapus-Darmor-BZH-scaffold-119p00030.1-BnaDAR
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043967 | ISO | PLAZA Integrative Orthology | histone H4 acetylation | AT3G01460 |
| GO:0048573 | ISO | PLAZA Integrative Orthology | photoperiodism, flowering | AT3G01460 |
| GO:0043966 | ISO | PLAZA Integrative Orthology | histone H3 acetylation | AT3G01460 |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT3G01460 |
| GO:0016573 | ISO | PLAZA Integrative Orthology | histone acetylation | AT3G01460 |
| GO:0010223 | ISO | PLAZA Integrative Orthology | secondary shoot formation | AT3G01460 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0004402 | ISO | PLAZA Integrative Orthology | histone acetyltransferase activity | AT3G01460 |
| GO:0003677 | ISO | PLAZA Homology (enrichment) | DNA binding | HOM05D003353 |
| GO:0042393 | ISO | PLAZA Integrative Orthology | histone binding | AT3G01460 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT3G01460 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003889 | FY-rich, C-terminal |
| IPR036427 | Bromodomain-like superfamily |
| IPR001965 | Zinc finger, PHD-type |
| IPR003888 | FY-rich, N-terminal |
| IPR028941 | WHIM2 domain |
| IPR028942 | WHIM1 domain |
| IPR019787 | Zinc finger, PHD-finger |
| IPR011011 | Zinc finger, FYVE/PHD-type |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |