Gene: Pp3c1_860

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c1_860
  • Transcript Identifier Pp3c1_860V3.1
  • Gene Type Coding gene
  • Location Chr01 : 601759-617985 : negative

Gene Family Information

  • ID HOM05D003353
  • #Genes/#Species 204/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c1_860V3.1
  • pacid 32968463
  • alias Phpat.001G004300
  • alias Pp1s200_118V6
  • uniprot A0A2K1L6G3

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043967
ISO
PLAZA Integrative Orthologyhistone H4 acetylation AT3G01460
GO:0048573
ISO
PLAZA Integrative Orthologyphotoperiodism, flowering AT3G01460
GO:0043966
ISO
PLAZA Integrative Orthologyhistone H3 acetylation AT3G01460
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT3G01460
GO:0016573
ISO
PLAZA Integrative Orthologyhistone acetylation AT3G01460
GO:0010223
ISO
PLAZA Integrative Orthologysecondary shoot formation AT3G01460

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0004402
ISO
PLAZA Integrative Orthologyhistone acetyltransferase activity AT3G01460
GO:0042393
ISO
PLAZA Integrative Orthologyhistone binding AT3G01460

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G01460

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR028942 WHIM1 domain
IPR036427 Bromodomain-like superfamily
IPR011011 Zinc finger, FYVE/PHD-type
IPR028941 WHIM2 domain
IPR019787 Zinc finger, PHD-finger
IPR001965 Zinc finger, PHD-type
IPR001487 Bromodomain
IPR018501 DDT domain
Mapman id Description
12.4.4.6 Chromatin organisation.nucleosome remodeling.SWR1 chromatin remodeling complex.methylation reader component MBD9