Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p13520 Brassica napus
A01p36410 Brassica napus
A03p40510 Brassica napus
A05p20990 Brassica napus
A05p31750 Brassica napus
A05p31760 Brassica napus
A06p04300 Brassica napus
A06p04310 Brassica napus
A08p04570 Brassica napus
Aa31LG10G5190 Aethionema arabicum
Aa31LG10G5200 Aethionema arabicum
Aa31LG8G4890 Aethionema arabicum
Actinidia06843 Actinidia chinensis
Actinidia39846 Actinidia chinensis
AL1G55270 Arabidopsis lyrata
AL1G55280 Arabidopsis lyrata
AL3G31190 Arabidopsis lyrata
Aqoxy3G00110 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0WKN8B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5E7A70 Arachis hypogaea
AT1G48610 Arabidopsis thaliana
AT1G48620 Arabidopsis thaliana
AT3G18035 Arabidopsis thaliana
ATR1102G021 Amborella trichopoda
Atru.chr9.1752 Acer truncatum
BcaB02g11397 Brassica carinata
BcaB02g11398 Brassica carinata
BcaB04g17392 Brassica carinata
BcaB04g17393 Brassica carinata
BcaB04g18555 Brassica carinata
BcaB04g18978 Brassica carinata
BcaB04g20799 Brassica carinata
BcaB06g25871 Brassica carinata
BcaB07g33727 Brassica carinata
BcaB07g33728 Brassica carinata
BcaC01g03712 Brassica carinata
BcaC05g27560 Brassica carinata
BcaC05g27562 Brassica carinata
BcaC05g28715 Brassica carinata
BcaC05g28717 Brassica carinata
BcaC05g28719 Brassica carinata
BcaC05g28723 Brassica carinata
BcaC07g37124 Brassica carinata
BcaC08g43067 Brassica carinata
BcaC08g43068 Brassica carinata
BcaC08g43069 Brassica carinata
BcaC08g43070 Brassica carinata
BcaC09g48763 Brassica carinata
BcaNung05558 Brassica carinata
BcaNung05560 Brassica carinata
BolC1t04578H Brassica oleracea
BolC3t17226H Brassica oleracea
BolC5t32256H Brassica oleracea
BolC5t33558H Brassica oleracea
BolC5t33560H Brassica oleracea
BolC6t35457H Brassica oleracea
BolC6t35458H Brassica oleracea
BolC8t47300H Brassica oleracea
BraA01t03706Z Brassica rapa
BraA03t13210Z Brassica rapa
BraA05t21004Z Brassica rapa
BraA05t22007Z Brassica rapa
BraA05t22008Z Brassica rapa
BraA06t23634Z Brassica rapa
BraA06t23635Z Brassica rapa
BraA08t32487Z Brassica rapa
C01p16360 Brassica napus
C01p46160 Brassica napus
C03p49350 Brassica napus
C05p35440 Brassica napus
C05p35460 Brassica napus
C05p48190 Brassica napus
C05p48200 Brassica napus
C05p48240 Brassica napus
C06p03250 Brassica napus
C06p03260 Brassica napus
C08p04940 Brassica napus
CAN.G1129.17 Capsicum annuum
CANSAT56G3283 Cannabis sativa
CARHR038220 Cardamine hirsuta
CARHR038230 Cardamine hirsuta
CARHR093350 Cardamine hirsuta
Carub.0001s3775 Capsella rubella
Carub.0001s3776 Capsella rubella
Carub.0003s1775 Capsella rubella
Ca_17205_v3 Cicer arietinum L.
Ca_25315_v3 Cicer arietinum L.
Cc04_g06460 Coffea canephora
CDE05G0743 Ceratophyllum demersum
CDE05G1078 Ceratophyllum demersum
CDE05G1564 Ceratophyllum demersum
Cfa019681 Carpinus fangiana
Ciclev10008667m.g Citrus clementina
CiPaw.16G091800 Carya illinoinensis
COL.COLO4_31503 Corchorus olitorius
Cpa.g.sc3.415 Carica papaya
CSS0006846 Camellia sinensis var. sinensis
CSS0023887 Camellia sinensis var. sinensis
CSS0036038 Camellia sinensis var. sinensis
DCAR_011326 Daucus carota
DCAR_014730 Daucus carota
DCAR_015110 Daucus carota
DCAR_031739 Daucus carota
Dinv10182 Davidia involucrata
Dinv18258 Davidia involucrata
Duzib248G0796 Durio zibethinus
Duzib251G0590 Durio zibethinus
Duzib268G1509 Durio zibethinus
ECA238G4031 Erigeron canadensis
Eucgr.B00872 Eucalyptus grandis
FAN04G1779 Fragaria x ananassa
FAN08G2597 Fragaria x ananassa
FAN13G3137 Fragaria x ananassa
FAN18G3362 Fragaria x ananassa
FvH4_5g17210 Fragaria vesca
Glyma.02G194100 Glycine max
Glyma.05G245500 Glycine max
Glyma.08G052600 Glycine max
Glyma.09G177500 Glycine max
Gohir.A04G146100 Gossypium hirsutum
Gohir.A07G223250 Gossypium hirsutum
Gohir.A12G161500 Gossypium hirsutum
Gohir.D04G190500 Gossypium hirsutum
Gohir.D07G229950 Gossypium hirsutum
Gohir.D12G164800 Gossypium hirsutum
Gorai.001G265100 Gossypium raimondii
Gorai.008G177600 Gossypium raimondii
Gorai.012G185800 Gossypium raimondii
GSVIVG01008411001 Vitis vinifera
HanXRQChr08g0221451 Helianthus annuus
HanXRQChr08g0227291 Helianthus annuus
Haze_18809 Corylus avellana
Hma1.2p1_0660F.1_g197680 Hydrangea macrophylla
HPP92_003549 Vanilla planifolia
Hund27359 Selenicereus undatus
Lalb_Chr05g0221801 Lupinus albus
Lalb_Chr09g0330451 Lupinus albus
Lalb_Chr14g0370761 Lupinus albus
Lalb_Chr22g0353371 Lupinus albus
Lj2g0013992 Lotus japonicus
Lj4g0004392 Lotus japonicus
Lj5A155T96 Lonicera japonica
Lsat_1_v5_gn_2_12280 Lactuca sativa
Lsat_1_v5_gn_2_12341 Lactuca sativa
Lsat_1_v5_gn_8_145000 Lactuca sativa
Manes.09G031800 Manihot esculenta
MD06G1230400 Malus domestica
MD14G1235000 Malus domestica
Medtr6g079520 Medicago truncatula
Medtr8g106980 Medicago truncatula
Migut.D01563 Erythranthe guttata
MSTRG.4568 Avicennia marina
MSTRG.9293 Avicennia marina
Nitab4.5_0001986g0050 Nicotiana tabacum
Nitab4.5_0004028g0030 Nicotiana tabacum
Nn4g24189 Nelumbo nucifera
Oeu026293.1 Olea europaea
Oeu026294.1 Olea europaea
Oeu046177.1 Olea europaea
Os05g0597200 Oryza sativa ssp. japonica
Peaxi162Scf00683g00148 Petunia axillaris
PGR083G2772 Punica granatum
PGSC0003DMG400005735 Solanum tuberosum
Phvul.002G328400 Phaseolus vulgaris
Phvul.004G151300 Phaseolus vulgaris
Potri.012G048500 Populus trichocarpa
Potri.015G040200 Populus trichocarpa
Prupe.5G231600 Prunus persica
Psat1g033000 Pisum sativum
Psat7g003080 Pisum sativum
PSO017G4429 Papaver somniferum
PSO478G1517 Papaver somniferum
QL10p028134 Quercus lobata
RcHm_v2.0_Chr1g0337641 Rosa chinensis
RcHm_v2.0_Chr7g0178581 Rosa chinensis
Rhsim08G0132500 Rhododendron simsii
Sabra12G0034100 Salix brachista
Sabra15G0056800 Salix brachista
Sabra15G0068400 Salix brachista
SalBow1G0879 Salvia bowleyana
SalBow1G4743 Salvia bowleyana
Sc12g0007140 Simmondsia chinensis
SGA_v2.0_scaffold168G38497 Striga asiatica
SGA_v2.0_scaffold171G38920 Striga asiatica
Solyc03g119130.3 Solanum lycopersicum
Sopen00g010880 Solanum pennellii
Sopen00g014070 Solanum pennellii
Sopen03g038020 Solanum pennellii
Sp1g35580 Schrenkiella parvula
Sp1g35590 Schrenkiella parvula
Sp3g16150 Schrenkiella parvula
TAR622G0364 Trochodendron aralioides
TAR622G1365 Trochodendron aralioides
THA.LOC104820353 Tarenaya hassleriana
THA.LOC104821831 Tarenaya hassleriana
THA.LOC104821833 Tarenaya hassleriana
Thecc.03G053100 Theobroma cacao
Thhalv10011410m.g Eutrema salsugineum
Thhalv10011757m.g Eutrema salsugineum
Thhalv10020566m.g Eutrema salsugineum
TPR.G12869 Trifolium pratense
TPR.G8621 Trifolium pratense
TWI81G0813 Tripterygium wilfordii
vmacro17784 Vaccinium macrocarpon
VMungo0251G1191 Vigna mungo
VMungo0464G1650 Vigna mungo
Zm00001eb279020 Zea mays

User provided reference genes

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