Gene: AT1G48610

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G48610
  • Transcript Identifier AT1G48610.1
  • Gene Type Coding gene
  • Location Chr1 : 17971027-17972798 : negative

Gene Family Information

  • ID HOM05D003305
  • #Genes/#Species 207/81
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G48610.1
  • uniprot Q94AD1

Descriptions

  • Description AT hook motif-containing protein
  • Computational description AT hook motif-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: A.T hook-like (InterPro:IPR020478), AT hook, DNA-binding motif (InterPro:IPR017956); Has 1118 Blast hits to 855 proteins in 246 species: Archae - 0; Bacteria - 355; Metazoa - 300; Fungi - 142; Plants - 155; Viruses - 6; Other Eukaryotes - 160 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process
GO:0006334
ISO
PLAZA Homology (enrichment)nucleosome assembly HOM05D003305

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
HDA
ISM
Gene Ontologynucleus1
GO:0000786
ISO
PLAZA Homology (enrichment)nucleosome HOM05D003305

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017956 AT hook, DNA-binding motif
Mapman id Description
35.1 not assigned.annotated