Gene: AT3G18035

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G18035
  • Transcript Identifier AT3G18035.2
  • Gene Type Coding gene
  • Location Chr3 : 6170309-6171558 : negative

Gene Family Information

  • ID HOM05D003305
  • #Genes/#Species 207/81
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G18035.2
  • symbol HON4
  • uniprot Q9LSK7

Descriptions

  • Description winged-helix DNA-binding transcription factor family protein
  • Computational description HON4; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), A.T hook-like (InterPro:IPR020478), AT hook, DNA-binding motif (InterPro:IPR017956), Histone H1/H5 (InterPro:IPR005818); BEST Arabidopsis thaliana protein match is: high mobility group A5 (TAIR:AT1G48620.1); Has 2301 Blast hits to 2184 proteins in 377 species: Archae - 0; Bacteria - 351; Metazoa - 868; Fungi - 344; Plants - 528; Viruses - 17; Other Eukaryotes - 193 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006334
IEA
Gene Ontologynucleosome assembly
GO:0006334
IEA
InterPronucleosome assembly
GO:0016584
IBA
Gene Ontologynucleosome positioning1
GO:0031936
IBA
Gene Ontologynegative regulation of chromatin silencing1
GO:0030261
IBA
Gene Ontologychromosome condensation1
GO:0045910
IBA
Gene Ontologynegative regulation of DNA recombination1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003690
IBA
Gene Ontologydouble-stranded DNA binding1
GO:0031492
IBA
Gene Ontologynucleosomal DNA binding1
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000786
IEA
Gene Ontologynucleosome
GO:0000786
IEA
InterPronucleosome
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus1
GO:0005730
IBA
Gene Ontologynucleolus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017956 AT hook, DNA-binding motif
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR005818 Linker histone H1/H5, domain H15
IPR036390 Winged helix DNA-binding domain superfamily
Mapman id Description
35.1 not assigned.annotated