Gene: PGSC0003DMG400005735

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400005735
  • Transcript Identifier PGSC0003DMT400014700
  • Gene Type Coding gene
  • Location ST4.03ch03 : 58708405-58712991 : positive

Gene Family Information

  • ID HOM05D003305
  • #Genes/#Species 207/81
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37463331
  • id PGSC0003DMG400005735.v4.03
  • uniprot M1A4R1

Descriptions

  • Description DNA-binding protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006334
IEA
GOA Databasenucleosome assembly
GO:0006334
IEA
InterPronucleosome assembly
GO:0030261
IBA
GOA Databasechromosome condensation
GO:0016584
IBA
GOA Databasenucleosome positioning
GO:0031936
IBA
GOA Databasenegative regulation of chromatin silencing
GO:0045910
IBA
GOA Databasenegative regulation of DNA recombination
GO:0009294
ISO
PLAZA Integrative OrthologyDNA mediated transformation AT1G48620

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0031492
IBA
GOA Databasenucleosomal DNA binding
GO:0003690
IBA
GOA Databasedouble-stranded DNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000786
IEA
GOA Databasenucleosome
GO:0000786
IEA
InterPronucleosome
GO:0005634
IBA
IEA
GOA Databasenucleus
GO:0005730
IBA
GOA Databasenucleolus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005818 Linker histone H1/H5, domain H15
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR017956 AT hook, DNA-binding motif
IPR036390 Winged helix DNA-binding domain superfamily
Mapman id Description
35.2 not assigned.not annotate