Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p37650 Brassica napus
A03p49450 Brassica napus
A09p49870 Brassica napus
Aa31LG10G6240 Aethionema arabicum
Aa31LG8G3770 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4942 Anthoceros agrestis
Actinidia19581 Actinidia chinensis
Actinidia40288 Actinidia chinensis
Ah.08g212490 Amaranthus hybridus
AL3G29570 Arabidopsis lyrata
AL7G39370 Arabidopsis lyrata
Aqoxy3G03983 Aquilegia oxysepala
Aqoxy3G03984 Aquilegia oxysepala
Aqoxy5G00755 Aquilegia oxysepala
Aqoxy5G03295 Aquilegia oxysepala
Aqoxy7G03551 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9TJ054 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JJQ0MC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KBV6L0 Arachis hypogaea
AT3G16650 Arabidopsis thaliana
AT4G15900 Arabidopsis thaliana
ATR0796G128 Amborella trichopoda
Atru.chr4.2874 Acer truncatum
AUR62008590 Chenopodium quinoa
AUR62034658 Chenopodium quinoa
BcaC06g32973 Brassica carinata
BcaC06g33437 Brassica carinata
BcaC09g48619 Brassica carinata
BcaC09g50284 Brassica carinata
BcaNung00239 Brassica carinata
BolC1t02648H Brassica oleracea
BolC1t04740H Brassica oleracea
BolC7t45277H Brassica oleracea
BolC8t50839H Brassica oleracea
BraA01t02073Z Brassica rapa
BraA01t03826Z Brassica rapa
BraA03t14046Z Brassica rapa
BraA09t40438Z Brassica rapa
C01p26990 Brassica napus
C01p47680 Brassica napus
C07p47500 Brassica napus
CANSAT78G0131 Cannabis sativa
CARHR091900 Cardamine hirsuta
CARHR290440 Cardamine hirsuta
Carub.0003s1638 Capsella rubella
Carub.0007s2576 Capsella rubella
Ca_01925_v3 Cicer arietinum L.
CBR_g46442 Chara braunii
CBR_g46444 Chara braunii
Cc02_g37840 Coffea canephora
CDE08G1027 Ceratophyllum demersum
CDE09G0842 Ceratophyllum demersum
Cfa002537 Carpinus fangiana
Ciclev10004853m.g Citrus clementina
CiPaw.01G147300 Carya illinoinensis
CiPaw.02G081900 Carya illinoinensis
CiPaw.06G074500 Carya illinoinensis
CiPaw.14G132800 Carya illinoinensis
ClCG06G005050 Citrullus lanatus
COL.COLO4_06938 Corchorus olitorius
COL.COLO4_13845 Corchorus olitorius
COL.COLO4_28010 Corchorus olitorius
Cpa.g.sc16.189 Carica papaya
Cre10.g446900 Chlamydomonas reinhardtii
CsaV3_6G023930 Cucumis sativus L.
CsaV3_6G046580 Cucumis sativus L.
CSS0009030 Camellia sinensis var. sinensis
CSS0013014 Camellia sinensis var. sinensis
DCAR_003343 Daucus carota
DCAR_008606 Daucus carota
DCAR_030161 Daucus carota
DCAR_030163 Daucus carota
DCAR_030165 Daucus carota
Dinv29761 Davidia involucrata
Duzib052G0276 Durio zibethinus
Duzib151G0067 Durio zibethinus
ECA234G0824 Erigeron canadensis
ECA234G3327 Erigeron canadensis
EL10Ac7g17420 Beta vulgaris
Eucgr.H03935 Eucalyptus grandis
FAN07G0399 Fragaria x ananassa
FAN07G0835 Fragaria x ananassa
FAN07G1152 Fragaria x ananassa
FAN12G0468 Fragaria x ananassa
FAN12G3743 Fragaria x ananassa
FAN12G4234 Fragaria x ananassa
FAN17G0608 Fragaria x ananassa
FAN17G2078 Fragaria x ananassa
FvH4_4g18400 Fragaria vesca
FvH4_4g23450 Fragaria vesca
Glyma.09G043800 Glycine max
Glyma.15G149300 Glycine max
Gohir.A02G049900 Gossypium hirsutum
Gohir.A09G238100 Gossypium hirsutum
Gohir.D02G055000 Gossypium hirsutum
Gohir.D06G061866 Gossypium hirsutum
Gohir.D09G239000 Gossypium hirsutum
Gohir.D11G250150 Gossypium hirsutum
Gorai.005G060900 Gossypium raimondii
Gorai.005G064200 Gossypium raimondii
Gorai.006G261700 Gossypium raimondii
Gorai.007G268100 Gossypium raimondii
GSVIVG01035143001 Vitis vinifera
HanXRQChr05g0140631 Helianthus annuus
HanXRQChr11g0341891 Helianthus annuus
HanXRQChr15g0490951 Helianthus annuus
HanXRQChr17g0561551 Helianthus annuus
Haze_01185 Corylus avellana
Haze_18316 Corylus avellana
Haze_27215 Corylus avellana
Hma1.2p1_1185F.1_g264960 Hydrangea macrophylla
Hma1.2p1_1807F.1_g303310 Hydrangea macrophylla
Hma1.2p1_1807F.1_g303320 Hydrangea macrophylla
HPP92_023226 Vanilla planifolia
Hund20540 Selenicereus undatus
Lalb_Chr15g0083461 Lupinus albus
Lalb_Chr18g0051601 Lupinus albus
Lj6g0023887 Lotus japonicus
Lj7A515T86 Lonicera japonica
Lsat_1_v5_gn_4_36321 Lactuca sativa
Manes.03G196900 Manihot esculenta
Mapoly0016s0006 Marchantia polymorpha
MBI16_g12924_MAGBIO Magnolia biondii
MCO14G267 Micromonas commoda
MD00G1128100 Malus domestica
MD00G1184900 Malus domestica
MD05G1262800 Malus domestica
MD16G1081900 Malus domestica
MD16G1167100 Malus domestica
Medtr2g019400 Medicago truncatula
Medtr2g436500 Medicago truncatula
Medtr2g436510 Medicago truncatula
MELO3C007855.2 Cucumis melo
MELO3C021320.2 Cucumis melo
Migut.B01741 Erythranthe guttata
Migut.E01441 Erythranthe guttata
MSTRG.20825 Avicennia marina
Nitab4.5_0000244g0390 Nicotiana tabacum
Nitab4.5_0000593g0280 Nicotiana tabacum
Nitab4.5_0001251g0010 Nicotiana tabacum
Nitab4.5_0002089g0060 Nicotiana tabacum
Nitab4.5_0003111g0030 Nicotiana tabacum
Nitab4.5_0003111g0080 Nicotiana tabacum
Nitab4.5_0014715g0010 Nicotiana tabacum
Nn3g21489 Nelumbo nucifera
Nn4g25790 Nelumbo nucifera
Os03g0339100 Oryza sativa ssp. japonica
Peaxi162Scf00056g00015 Petunia axillaris
Peaxi162Scf00089g00028 Petunia axillaris
Peaxi162Scf00321g00017 Petunia axillaris
Peaxi162Scf00409g00039 Petunia axillaris
Peaxi162Scf00858g00015 Petunia axillaris
Peaxi162Scf00858g00016 Petunia axillaris
PGR004G2696 Punica granatum
PGSC0003DMG400008918 Solanum tuberosum
Phvul.009G249100 Phaseolus vulgaris
Potri.010G012800 Populus trichocarpa
Pp3c16_8560 Physcomitrium patens
Pp3c5_15520 Physcomitrium patens
PRCOL_00003913 Prasinoderma coloniale
Prupe.1G134100 Prunus persica
Prupe.6G318200 Prunus persica
Psat1g155040 Pisum sativum
PSO017G1819 Papaver somniferum
PSO170G4560 Papaver somniferum
PSO407G0331 Papaver somniferum
PSO478G1326 Papaver somniferum
QL06p009632 Quercus lobata
RcHm_v2.0_Chr4g0422851 Rosa chinensis
RcHm_v2.0_Chr4g0429811 Rosa chinensis
RcHm_v2.0_Chr4g0429821 Rosa chinensis
Rhsim04G0224200 Rhododendron simsii
Rhsim06G0116500 Rhododendron simsii
Rhsim12G0061000 Rhododendron simsii
Sabra10G0008000 Salix brachista
SalBow3G0655 Salvia bowleyana
Sc19g0005390 Simmondsia chinensis
Sed0025564 Sechium edule
SEGI_14553 Sequoiadendron giganteum
SGA_v2.0_scaffold95G28842 Striga asiatica
SHI00250 Sapria himalayana
SHI00251 Sapria himalayana
SHI00253 Sapria himalayana
SMO240G0024 Selaginella moellendorffii
SMO340G0096 Selaginella moellendorffii
Solyc01g094480.4 Solanum lycopersicum
Solyc09g010620.1 Solanum lycopersicum
Sopen01g038290 Solanum pennellii
Sopen09g005330 Solanum pennellii
Sp3g14940 Schrenkiella parvula
Sp7g14350 Schrenkiella parvula
SpUn1161_0010 Schrenkiella parvula
TAR365G1013 Trochodendron aralioides
TAR623G1368 Trochodendron aralioides
THA.LOC104820293 Tarenaya hassleriana
THA.LOC104821781 Tarenaya hassleriana
Thecc.04G286600 Theobroma cacao
Thhalv10022263m.g Eutrema salsugineum
Thhalv10025068m.g Eutrema salsugineum
TPR.G20574 Trifolium pratense
TPR.G21926 Trifolium pratense
TPR.G22357 Trifolium pratense
TPR.G39909 Trifolium pratense
TPR.G7328 Trifolium pratense
TWI09G1311 Tripterygium wilfordii
unitig_22.g5357 Utricularia gibba
unitig_8.g3803 Utricularia gibba
vmacro08167 Vaccinium macrocarpon
VMungo1309G2776 Vigna mungo
Zm00001eb051300 Zea mays

User provided reference genes

Program Settings