Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p00900 Brassica napus
A01p00920 Brassica napus
A04p16880 Brassica napus
A09p57600 Brassica napus
Aa31LG6G15240 Aethionema arabicum
Aa31LG7G14430 Aethionema arabicum
Aa31LG8G13070 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.467 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2854 Anthoceros agrestis
Actinidia06543 Actinidia chinensis
Actinidia06544 Actinidia chinensis
Actinidia19997 Actinidia chinensis
Ah.02g126130 Amaranthus hybridus
AL4G11900 Arabidopsis lyrata
AL7G11560 Arabidopsis lyrata
AL7G12310 Arabidopsis lyrata
AL7G13040 Arabidopsis lyrata
Aqoxy6G00734 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.56KYQ9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G6ARYH Arachis hypogaea
AT2G22400 Arabidopsis thaliana
AT4G40000 Arabidopsis thaliana
ATR0684G089 Amborella trichopoda
Atru.chr3.1361 Acer truncatum
AUR62003252 Chenopodium quinoa
AUR62027218 Chenopodium quinoa
BcaB08g35063 Brassica carinata
BcaC02g08664 Brassica carinata
BcaC02g08665 Brassica carinata
BcaC02g08709 Brassica carinata
BcaC07g41076 Brassica carinata
BcaNung00924 Brassica carinata
BcaNung00925 Brassica carinata
BcaNung00929 Brassica carinata
BcaNung05188 Brassica carinata
BcaNung05191 Brassica carinata
BolC1t00102H Brassica oleracea
BolC3t18509H Brassica oleracea
BolC4t26736H Brassica oleracea
BolC8t51644H Brassica oleracea
BraA01t00089Z Brassica rapa
BraA01t00090Z Brassica rapa
BraA04t17321Z Brassica rapa
BraA09t41152Z Brassica rapa
C01p01050 Brassica napus
C04p51440 Brassica napus
C08p40800 Brassica napus
CAN.G151.12 Capsicum annuum
CAN.G423.26 Capsicum annuum
CAN.G905.28 Capsicum annuum
CANSAT01G1547 Cannabis sativa
CARHR113590 Cardamine hirsuta
CARHR246680 Cardamine hirsuta
Carub.0004s0156 Capsella rubella
Carub.0007s0196 Capsella rubella
Ca_03752_v3 Cicer arietinum L.
Ca_04837_v3 Cicer arietinum L.
Ca_16514_v3 Cicer arietinum L.
Ca_17757_v3 Cicer arietinum L.
Ca_27302_v3 Cicer arietinum L.
Ca_30950_v3 Cicer arietinum L.
CBR_g12755 Chara braunii
CBR_g80544 Chara braunii
Cc07_g14750 Coffea canephora
CDE10G0727 Ceratophyllum demersum
Cfa002613 Carpinus fangiana
Cfa024691 Carpinus fangiana
Ciclev10024895m.g Citrus clementina
CiPaw.03G144800 Carya illinoinensis
ClCG01G018610 Citrullus lanatus
COL.COLO4_27282 Corchorus olitorius
Cpa.g.sc55.83 Carica papaya
Cre03.g179860 Chlamydomonas reinhardtii
Cre10.g433650 Chlamydomonas reinhardtii
Cre13.g602300 Chlamydomonas reinhardtii
CsaV3_6G045280 Cucumis sativus L.
DCAR_003477 Daucus carota
Dinv13221 Davidia involucrata
Duzib147G1622 Durio zibethinus
ECA246G0394 Erigeron canadensis
EL10Ac6g14824 Beta vulgaris
Eucgr.H04746 Eucalyptus grandis
Eucgr.I00532 Eucalyptus grandis
FAN19G0293 Fragaria x ananassa
FAN23G1395 Fragaria x ananassa
FAN26G2141 Fragaria x ananassa
FAN28G0091 Fragaria x ananassa
FvH4_1g20370 Fragaria vesca
Glyma.05G176167 Glycine max
Glyma.05G176233 Glycine max
Glyma.08G133700 Glycine max
Glyma.11G241400 Glycine max
Glyma.18G015566 Glycine max
Glyma.18G015632 Glycine max
Gohir.A02G129100 Gossypium hirsutum
Gohir.D03G039900 Gossypium hirsutum
Gorai.003G041000 Gossypium raimondii
GSVIVG01003416001 Vitis vinifera
HanXRQChr04g0104711 Helianthus annuus
HanXRQChr07g0196311 Helianthus annuus
Haze_24864 Corylus avellana
Haze_24867 Corylus avellana
Haze_24868 Corylus avellana
Hma1.2p1_0019F.1_g013690 Hydrangea macrophylla
HPP92_013098 Vanilla planifolia
HPP92_013110 Vanilla planifolia
HPP92_013131 Vanilla planifolia
Lalb_Chr07g0185301 Lupinus albus
Lalb_Chr13g0295911 Lupinus albus
Lalb_Chr23g0277521 Lupinus albus
Lalb_Chr23g0277531 Lupinus albus
Lj2A541T60 Lonicera japonica
Lj2C541T5 Lonicera japonica
Lj4g0011115 Lotus japonicus
Lj6g0024442 Lotus japonicus
Lsat_1_v5_gn_5_45360 Lactuca sativa
Lsat_1_v5_gn_6_82341 Lactuca sativa
Manes.12G131000 Manihot esculenta
Mapoly0022s0008 Marchantia polymorpha
MBI02_g27964_MAGBIO Magnolia biondii
MCO10G092 Micromonas commoda
MCO11G029 Micromonas commoda
MCO12G374 Micromonas commoda
MCO16G190 Micromonas commoda
MCO16G417 Micromonas commoda
MD01G1034300 Malus domestica
MD15G1321500 Malus domestica
MD15G1321600 Malus domestica
Medtr3g086950 Medicago truncatula
Medtr8g089980 Medicago truncatula
MELO3C007741.2 Cucumis melo
Migut.H02342 Erythranthe guttata
MSTRG.2578 Avicennia marina
Nitab4.5_0000128g0250 Nicotiana tabacum
Nitab4.5_0000241g0270 Nicotiana tabacum
Nitab4.5_0002604g0040 Nicotiana tabacum
Nitab4.5_0012684g0010 Nicotiana tabacum
Nn5g30027 Nelumbo nucifera
Oeu056635.1 Olea europaea
Os08g0484400 Oryza sativa ssp. japonica
Os09g0471900 Oryza sativa ssp. japonica
Peaxi162Scf00044g00112 Petunia axillaris
Peaxi162Scf00381g00061 Petunia axillaris
PGR004G2195 Punica granatum
PGR102G0950 Punica granatum
PGSC0003DMG400016157 Solanum tuberosum
Phvul.001G253400 Phaseolus vulgaris
Phvul.002G261300 Phaseolus vulgaris
Potri.007G096100 Populus trichocarpa
Pp3c15_5210 Physcomitrium patens
Pp3c15_5220 Physcomitrium patens
PRCOL_00002419 Prasinoderma coloniale
PRCOL_00004068 Prasinoderma coloniale
PRCOL_00004940 Prasinoderma coloniale
PRCOL_00005625 Prasinoderma coloniale
PRCOL_00006481 Prasinoderma coloniale
Prupe.6G191700 Prunus persica
Psat3g056560 Pisum sativum
Psat4g135800 Pisum sativum
Psat5g090760 Pisum sativum
Psat6g077920 Pisum sativum
Psat7g057040 Pisum sativum
Psat7g145480 Pisum sativum
PSO541G6125 Papaver somniferum
PSO675G0168 Papaver somniferum
PSO675G0282 Papaver somniferum
PSO675G3474 Papaver somniferum
PSO675G5792 Papaver somniferum
PSO675G6953 Papaver somniferum
PSO675G7081 Papaver somniferum
PSO675G9385 Papaver somniferum
QL06p048297 Quercus lobata
RcHm_v2.0_Chr2g0112501 Rosa chinensis
Rhsim10G0166900 Rhododendron simsii
Sabra07G0079200 Salix brachista
SalBow3G0841 Salvia bowleyana
SalBow3G1582 Salvia bowleyana
Sc03g0000100 Simmondsia chinensis
Sed0002614 Sechium edule
Sed0018597 Sechium edule
SEGI_04873 Sequoiadendron giganteum
SEGI_08254 Sequoiadendron giganteum
SEGI_14491 Sequoiadendron giganteum
SEGI_24386 Sequoiadendron giganteum
SEGI_32864 Sequoiadendron giganteum
SEGI_39110 Sequoiadendron giganteum
SGA_v2.0_scaffold111G31500 Striga asiatica
SHI01114 Sapria himalayana
SHI01116 Sapria himalayana
SMO165G0121 Selaginella moellendorffii
SMO302G0024 Selaginella moellendorffii
Solyc05g051520.3 Solanum lycopersicum
Solyc11g010110.3 Solanum lycopersicum
Sopen05g029940 Solanum pennellii
Sopen11g004910 Solanum pennellii
Sp4g01430 Schrenkiella parvula
Sp7g35870 Schrenkiella parvula
TAR628G1304 Trochodendron aralioides
THA.LOC104807678 Tarenaya hassleriana
Thecc.01G096900 Theobroma cacao
Thhalv10000050m.g Eutrema salsugineum
Thhalv10000064m.g Eutrema salsugineum
Thhalv10024482m.g Eutrema salsugineum
TPR.G15995 Trifolium pratense
TPR.G6241 Trifolium pratense
TWI74G0107 Tripterygium wilfordii
TWI77G0296 Tripterygium wilfordii
unitig_699.g19581 Utricularia gibba
vmacro12976 Vaccinium macrocarpon
VMungo0251G3398 Vigna mungo
VMungo1383G1326 Vigna mungo
Zm00001eb033550 Zea mays
Zm00001eb315780 Zea mays

User provided reference genes

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