Gene: Sopen11g004910

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g004910
  • Transcript Identifier Sopen11g004910.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 3359113-3365225 : negative

Gene Family Information

  • ID HOM05D003208
  • #Genes/#Species 213/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g004910.1

Descriptions

  • Description S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | FUNCTIONS IN: methyltransferase activity, RNA binding | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p , Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site | BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001510
IEA
InterProRNA methylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016428
IEA
InterProtRNA (cytosine-5-)-methyltransferase activity
GO:0008168
IEA
InterPromethyltransferase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023270 tRNA (C5-cytosine) methyltransferase, NCL1
IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
IPR023267 RNA (C5-cytosine) methyltransferase
Mapman id Description
16.5.7.9 RNA processing.RNA modification.tRNA methylation.tRNA cytidine-methyltransferase (TRM4)