Gene: PGSC0003DMG400016157

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400016157
  • Transcript Identifier PGSC0003DMT400041672
  • Gene Type Coding gene
  • Location ST4.03ch11 : 2736719-2744821 : positive

Gene Family Information

  • ID HOM05D003208
  • #Genes/#Species 213/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37466779
  • id PGSC0003DMG400016157.v4.03
  • uniprot M1BBS0

Descriptions

  • Description NOL1/NOP2/sun family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001510
IBA
IEA
GOA DatabaseRNA methylation
GO:0001510
IEA
InterProRNA methylation
GO:0030488
IEA
GOA DatabasetRNA methylation
GO:0008033
IEA
GOA DatabasetRNA processing
GO:0032259
IEA
GOA Databasemethylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016428
IEA
GOA DatabasetRNA (cytosine-5-)-methyltransferase activity
GO:0016428
IEA
InterProtRNA (cytosine-5-)-methyltransferase activity
GO:0008168
IBA
IEA
GOA Databasemethyltransferase activity
GO:0008168
IEA
InterPromethyltransferase activity
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0000049
IEA
GOA DatabasetRNA binding
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023267 RNA (C5-cytosine) methyltransferase
IPR023270 tRNA (C5-cytosine) methyltransferase, NCL1
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type
Mapman id Description
16.5.7.9 RNA processing.RNA modification.tRNA methylation.tRNA cytidine-methyltransferase (TRM4)