Gene: Solyc05g051520.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g051520.3
  • Transcript Identifier Solyc05g051520.3.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 61271689-61283837 : positive

Gene Family Information

  • ID HOM05D003208
  • #Genes/#Species 213/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g051520.3.1
  • uniprot A0A3Q7GNH2
  • gene_id Solyc05g051520

Descriptions

  • Description S-adenosyl-L-methionine-dependent methyltransferase (AHRD V3.3 *** A0A2P4QYI9_RHIID)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001510
IBA
IEA
GOA DatabaseRNA methylation
GO:0001510
IEA
InterProRNA methylation
GO:0030488
IEA
GOA DatabasetRNA methylation
GO:0008033
IEA
GOA DatabasetRNA processing
GO:0032259
IEA
GOA Databasemethylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016428
IEA
GOA DatabasetRNA (cytosine-5-)-methyltransferase activity
GO:0016428
IEA
InterProtRNA (cytosine-5-)-methyltransferase activity
GO:0008168
IBA
IEA
GOA Databasemethyltransferase activity
GO:0008168
IEA
InterPromethyltransferase activity
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0000049
IEA
GOA DatabasetRNA binding
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023270 tRNA (C5-cytosine) methyltransferase, NCL1
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
IPR023267 RNA (C5-cytosine) methyltransferase
IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type
Mapman id Description
16.5.7.9 RNA processing.RNA modification.tRNA methylation.tRNA cytidine-methyltransferase (TRM4)