Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p08700 Brassica napus
A08p06810 Brassica napus
Aa31LG7G1680 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2484 Anthoceros agrestis
Actinidia12407 Actinidia chinensis
Actinidia12409 Actinidia chinensis
Actinidia14607 Actinidia chinensis
Actinidia14608 Actinidia chinensis
Ah.02g118940 Amaranthus hybridus
Ah.04g153760 Amaranthus hybridus
Ah.04g163950 Amaranthus hybridus
AL4G28570 Arabidopsis lyrata
AL9U10130 Arabidopsis lyrata
Aqoxy5G00139 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.F7U1GP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K9LPZT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L114HI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RMYF3V Arachis hypogaea
AT4G13430 Arabidopsis thaliana
ATR0787G024 Amborella trichopoda
ATR0787G215 Amborella trichopoda
Atru.chr4.1904 Acer truncatum
Atru.chr4.1907 Acer truncatum
AUR62013948 Chenopodium quinoa
AUR62019663 Chenopodium quinoa
BcaB01g03166 Brassica carinata
BcaB02g07721 Brassica carinata
BcaB04g17692 Brassica carinata
BcaC02g09423 Brassica carinata
BcaC04g23416 Brassica carinata
BcaC07g37364 Brassica carinata
BolC4t25824H Brassica oleracea
BolC6t37421H Brassica oleracea
BolC8t47666H Brassica oleracea
BolC9t53766H Brassica oleracea
BraA04t16563Z Brassica rapa
BraA08t32699Z Brassica rapa
C04p42460 Brassica napus
C06p22340 Brassica napus
C08p08140 Brassica napus
C09p08570 Brassica napus
CAN.G524.11 Capsicum annuum
CAN.G638.35 Capsicum annuum
CAN.G852.10 Capsicum annuum
CANSAT78G1988 Cannabis sativa
CARHR219070 Cardamine hirsuta
Carub.0007s2912 Capsella rubella
Ca_11883_v3 Cicer arietinum L.
Ca_29174_v3 Cicer arietinum L.
CBR_g53549 Chara braunii
Cc03_g06410 Coffea canephora
CDE02G3734 Ceratophyllum demersum
CDE09G0390 Ceratophyllum demersum
Cfa014789 Carpinus fangiana
Cfa014790 Carpinus fangiana
Cfa023379 Carpinus fangiana
Cfa023744 Carpinus fangiana
Cfa024802 Carpinus fangiana
Ciclev10004776m.g Citrus clementina
CiPaw.01G098800 Carya illinoinensis
CiPaw.01G177200 Carya illinoinensis
CiPaw.02G106200 Carya illinoinensis
CiPaw.02G106400 Carya illinoinensis
ClCG09G012580 Citrullus lanatus
COL.COLO4_15975 Corchorus olitorius
COL.COLO4_15976 Corchorus olitorius
Cpa.g.sc59.7 Carica papaya
Cre01.g004500 Chlamydomonas reinhardtii
CsaV3_3G049730 Cucumis sativus L.
CSS0008180 Camellia sinensis var. sinensis
CSS0035703 Camellia sinensis var. sinensis
DCAR_024295 Daucus carota
DCAR_027353 Daucus carota
Dinv19267 Davidia involucrata
Dinv27120 Davidia involucrata
Dinv29798 Davidia involucrata
Duzib151G0757 Durio zibethinus
Duzib151G1146 Durio zibethinus
ECA248G0532 Erigeron canadensis
ECA248G1257 Erigeron canadensis
EL10Ac3g06677 Beta vulgaris
Eucgr.H02913 Eucalyptus grandis
FAN12G3900 Fragaria x ananassa
FAN17G0040 Fragaria x ananassa
FAN17G2284 Fragaria x ananassa
FAN22G1113 Fragaria x ananassa
FAN22G2242 Fragaria x ananassa
FvH4_4g04720 Fragaria vesca
FvH4_5g09890 Fragaria vesca
Glyma.14G217300 Glycine max
Glyma.17G256102 Glycine max
Glyma.20G199600 Glycine max
Gohir.A09G059700 Gossypium hirsutum
Gohir.A09G059800 Gossypium hirsutum
Gohir.A09G227100 Gossypium hirsutum
Gohir.D09G059000 Gossypium hirsutum
Gohir.D09G059100 Gossypium hirsutum
Gohir.D09G228100 Gossypium hirsutum
Gorai.006G073300 Gossypium raimondii
Gorai.006G073400 Gossypium raimondii
Gorai.006G250800 Gossypium raimondii
GSVIVG01027922001 Vitis vinifera
GSVIVG01029978001 Vitis vinifera
HanXRQChr01g0023041 Helianthus annuus
HanXRQChr14g0434761 Helianthus annuus
HanXRQChr14g0434771 Helianthus annuus
Haze_11466 Corylus avellana
Haze_22165 Corylus avellana
Hma1.2p1_0112F.1_g054810 Hydrangea macrophylla
HPP92_007614 Vanilla planifolia
HPP92_026397 Vanilla planifolia
HPP92_026398 Vanilla planifolia
Hund24873 Selenicereus undatus
Lalb_Chr11g0067221 Lupinus albus
Lalb_Chr23g0271781 Lupinus albus
Lj3A639T17 Lonicera japonica
Lj3A640T23 Lonicera japonica
Lj3C639T4 Lonicera japonica
Lj5g0009083 Lotus japonicus
Lj6g0010145 Lotus japonicus
Lsat_1_v5_gn_0_1580 Lactuca sativa
Lsat_1_v5_gn_1_75540 Lactuca sativa
Lsat_1_v5_gn_2_41240 Lactuca sativa
Lsat_1_v5_gn_3_44940 Lactuca sativa
Manes.02G212060 Manihot esculenta
Manes.03G158100 Manihot esculenta
Manes.03G158200 Manihot esculenta
Manes.15G046300 Manihot esculenta
Mapoly0081s0061 Marchantia polymorpha
MBI10_g16829_MAGBIO Magnolia biondii
MBI10_g16830_MAGBIO Magnolia biondii
MCO01G562 Micromonas commoda
MCO09G712 Micromonas commoda
MD13G1222400 Malus domestica
MD13G1222500 Malus domestica
MD13G1222600 Malus domestica
MD13G1222700 Malus domestica
MD13G1222900 Malus domestica
MD16G1227200 Malus domestica
Medtr1g045750 Medicago truncatula
Medtr1g045760 Medicago truncatula
Medtr1g045770 Medicago truncatula
Medtr1g073200 Medicago truncatula
MELO3C003344.2 Cucumis melo
Migut.G00571 Erythranthe guttata
MSTRG.24656 Avicennia marina
Nitab4.5_0000592g0470 Nicotiana tabacum
Nitab4.5_0001041g0160 Nicotiana tabacum
Nitab4.5_0001041g0170 Nicotiana tabacum
Nitab4.5_0002210g0050 Nicotiana tabacum
Nitab4.5_0002613g0050 Nicotiana tabacum
Nitab4.5_0005154g0020 Nicotiana tabacum
Nn1g02981 Nelumbo nucifera
Nn3g19795 Nelumbo nucifera
Oeu061871.1 Olea europaea
Os02g0125100 Oryza sativa ssp. japonica
Peaxi162Scf00242g01317 Petunia axillaris
Peaxi162Scf01044g00008 Petunia axillaris
Peaxi162Scf01044g00110 Petunia axillaris
Peaxi162Scf01044g00224 Petunia axillaris
Peaxi162Scf45037g00004 Petunia axillaris
PGR004G0234 Punica granatum
PGSC0003DMG400013459 Solanum tuberosum
PGSC0003DMG401001552 Solanum tuberosum
PGSC0003DMG402001552 Solanum tuberosum
Phvul.007G232000 Phaseolus vulgaris
Potri.008G172500 Populus trichocarpa
Potri.010G065100 Populus trichocarpa
Pp3c4_11270 Physcomitrium patens
PRCOL_00005264 Prasinoderma coloniale
Prupe.1G049300 Prunus persica
Psat3g068240 Pisum sativum
Psat6g107560 Pisum sativum
PSO764G0258 Papaver somniferum
PSO832G1505 Papaver somniferum
QL06p021218 Quercus lobata
RcHm_v2.0_Chr4g0395521 Rosa chinensis
RcHm_v2.0_Chr4g0395531 Rosa chinensis
RcHm_v2.0_Chr6g0278291 Rosa chinensis
Rhsim04G0171200 Rhododendron simsii
Rhsim07G0000200 Rhododendron simsii
Sabra08G0131800 Salix brachista
Sabra10G0042000 Salix brachista
SalBow2G1480 Salvia bowleyana
SalBow3G1186 Salvia bowleyana
SalBow3G3468 Salvia bowleyana
Sc19g0005580 Simmondsia chinensis
Sed0016595 Sechium edule
SEGI_14416 Sequoiadendron giganteum
SEGI_25287 Sequoiadendron giganteum
SEGI_32008 Sequoiadendron giganteum
SGA_v2.0_scaffold31G12624 Striga asiatica
SHI00769 Sapria himalayana
SMO235G0067 Selaginella moellendorffii
SMO347G0250 Selaginella moellendorffii
Solyc03g005730.4 Solanum lycopersicum
Solyc09g090900.4 Solanum lycopersicum
Sopen03g001740 Solanum pennellii
Sopen09g033880 Solanum pennellii
Sp7g10990 Schrenkiella parvula
TAR362G0704 Trochodendron aralioides
TAR633G1760 Trochodendron aralioides
THA.LOC104808742 Tarenaya hassleriana
THA.LOC104821631 Tarenaya hassleriana
Thecc.04G265800 Theobroma cacao
Thecc.04G265900 Theobroma cacao
Thhalv10024960m.g Eutrema salsugineum
TPR.G18564 Trifolium pratense
TPR.G23961 Trifolium pratense
TPR.G28479 Trifolium pratense
TWI09G1061 Tripterygium wilfordii
TWI73G0266 Tripterygium wilfordii
unitig_736.g22485 Utricularia gibba
vmacro08559 Vaccinium macrocarpon
vmacro08560 Vaccinium macrocarpon
VMungo0720G0086 Vigna mungo
VMungo0720G2760 Vigna mungo
Zm00001eb208610 Zea mays
Zm00001eb208760 Zea mays
Zm00001eb230780 Zea mays

User provided reference genes

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