Gene: COL.COLO4_15975

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_15975
  • Transcript Identifier COL.rna14746
  • Gene Type Coding gene
  • Location AWUE01015849.1 : 11190-15991 : negative

Gene Family Information

  • ID HOM05D003112
  • #Genes/#Species 220/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna14746
  • GenBank OMO95328.1
  • id gene15947
  • gene_name COLO4_15975
  • uniprot A0A1R3JKJ8

Descriptions

  • Description Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019761
ISO
PLAZA Integrative Orthologyglucosinolate biosynthetic process AT4G13430
GO:0008652
ISO
PLAZA Homology (enrichment)cellular amino acid biosynthetic process HOM05D003112

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051536
IEA
GOA Databaseiron-sulfur cluster binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0050486
ISO
PLAZA Integrative Orthologyintramolecular transferase activity, transferring hydroxy groups AT4G13430
GO:0016836
ISO
PLAZA Homology (enrichment)hydro-lyase activity HOM05D003112
GO:0051539
ISO
PLAZA Homology (enrichment)4 iron, 4 sulfur cluster binding HOM05D003112
GO:0003861
ISO
PLAZA Homology (enrichment)3-isopropylmalate dehydratase activity HOM05D003112

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036008 Aconitase, iron-sulfur domain
IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3
IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain
Mapman id Description
30.1.1.3.1 Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.methylthioalkylmalate isomerase heterodimer.large subunit
4.1.3.2.5.2.1 Amino acid metabolism.biosynthesis.pyruvate family.pyruvate-derived amino acids.leucine.isopropylmalate isomerase heterodimer.large subunit