Gene: C04p42460
General Information
Structural Information
- Species Brassica napus
- Gene Identifier C04p42460
- Transcript Identifier C04p42460
- Gene Type Coding gene
- Location C04 : 42844516-42847959 : positive
Gene Family Information
- ID HOM05D003112
- #Genes/#Species 220/100
- Phylogenetic origin
- ID ORTHO05D003660
- #Genes/#Species 210/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid C04p42460.1_BnaDAR
- v5 BnaCnng15040D
- single_cell_id C04p42460.1-BnaDAR
- ensembl GSBRNA2T00087256001
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008652 | IEA | InterPro | cellular amino acid biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003861 | IEA | InterPro | 3-isopropylmalate dehydratase activity | |
| GO:0016836 | IEA | InterPro | hydro-lyase activity | |
| GO:0051539 | IEA | InterPro | 4 iron, 4 sulfur cluster binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR033941 | 3-Isopropylmalate dehydratase, catalytic domain |
| IPR001030 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain |
| IPR015931 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 |
| IPR006251 | Homoaconitase/3-isopropylmalate dehydratase, large subunit |
| IPR036008 | Aconitase, iron-sulfur domain |
| Mapman id | Description |
|---|---|
| 30.1.1.3.1 | Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.methylthioalkylmalate isomerase heterodimer.large subunit |
| 4.1.3.2.5.2.1 | Amino acid metabolism.biosynthesis.pyruvate family.pyruvate-derived amino acids.leucine.isopropylmalate isomerase heterodimer.large subunit |