Gene: Sopen09g033880

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen09g033880
  • Transcript Identifier Sopen09g033880.1
  • Gene Type Coding gene
  • Location Spenn-ch09 : 81926934-81931548 : positive

Gene Family Information

  • ID HOM05D003112
  • #Genes/#Species 220/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen09g033880.1

Descriptions

  • Description Encodes methylthioalkylmalate isomerase. | isopropyl malate isomerase large subunit 1 (IIL1) | FUNCTIONS IN: lyase activity, intramolecular transferase activity, transferring hydroxy groups | INVOLVED IN: glucosinolate biosynthetic process, response to cadmium ion, metabolic process | LOCATED IN: chloroplast stroma, chloroplast | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha , Homoaconitase/3-isopropylmalate dehydratase, small/large subunit , Homoaconitase/3-isopropylmalate dehydratase, large subunit, subgroup , Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 , Aconitase-like core , Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 | BEST Arabidopsis thaliana protein match is: aconitase 2
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008652
IEA
InterProcellular amino acid biosynthetic process
GO:0019761
ISO
PLAZA Integrative Orthologyglucosinolate biosynthetic process AT4G13430

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003861
IEA
InterPro3-isopropylmalate dehydratase activity
GO:0016836
IEA
InterProhydro-lyase activity
GO:0051539
IEA
InterPro4 iron, 4 sulfur cluster binding
GO:0050486
ISO
PLAZA Integrative Orthologyintramolecular transferase activity, transferring hydroxy groups AT4G13430

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain
IPR033941 3-Isopropylmalate dehydratase, catalytic domain
IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3
IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit
IPR036008 Aconitase, iron-sulfur domain
Mapman id Description
30.1.1.3.1 Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.methylthioalkylmalate isomerase heterodimer.large subunit
4.1.3.2.5.2.1 Amino acid metabolism.biosynthesis.pyruvate family.pyruvate-derived amino acids.leucine.isopropylmalate isomerase heterodimer.large subunit