Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p02420 Brassica napus
A02p21790 Brassica napus
A03p06530 Brassica napus
A07p43050 Brassica napus
A10p24190 Brassica napus
Aa31LG11G15110 Aethionema arabicum
Aa31LG4G7860 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.140 Anthoceros agrestis
Actinidia03500 Actinidia chinensis
Actinidia29438 Actinidia chinensis
Ah.05g172470 Amaranthus hybridus
AL2G37980 Arabidopsis lyrata
AL6G25020 Arabidopsis lyrata
AL89U10030 Arabidopsis lyrata
AL8G44270 Arabidopsis lyrata
Aqoxy6G00147 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.143H5D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3M21FH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3W5UW3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.67PGGN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7NT61C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7RCK35 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8XGZ60 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.97RZQE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9W16JB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A8KD6A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BR1SHA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CSY7TV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D1ZLL8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D42DGE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K88D63 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KT2W2L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KY4EEB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L79Y0Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N3M6GA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PS4C7F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QJK9MQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U4K4JK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VL5M3T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VZ45Z4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W0PKFE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W3FNGG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XT9L53 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZDY2DP Arachis hypogaea
AT1G77750 Arabidopsis thaliana
AT5G14320 Arabidopsis thaliana
ATR0684G219 Amborella trichopoda
Atru.chr1.3247 Acer truncatum
Atru.chr11.1129 Acer truncatum
Atru.chr13.1326 Acer truncatum
Atru.chr13.1328 Acer truncatum
Atru.chr13.1331 Acer truncatum
Atru.chr13.1370 Acer truncatum
Atru.chr13.1372 Acer truncatum
Atru.chr13.1374 Acer truncatum
AUR62004702 Chenopodium quinoa
AUR62023618 Chenopodium quinoa
BcaB01g05121 Brassica carinata
BcaB01g06334 Brassica carinata
BcaB01g06381 Brassica carinata
BcaB03g15926 Brassica carinata
BcaB05g25073 Brassica carinata
BcaB08g36974 Brassica carinata
BcaC03g13501 Brassica carinata
BcaC03g13502 Brassica carinata
BcaC03g15767 Brassica carinata
BcaC04g19045 Brassica carinata
BcaC08g47595 Brassica carinata
BcaNung06313 Brassica carinata
BolC2t06609H Brassica oleracea
BolC2t09523H Brassica oleracea
BolC3t13256H Brassica oleracea
BolC9t59124H Brassica oleracea
BraA02t05212Z Brassica rapa
BraA03t09985Z Brassica rapa
BraA07t31826Z Brassica rapa
BraA10t44482Z Brassica rapa
C02p06670 Brassica napus
C02p35090 Brassica napus
C03p07550 Brassica napus
C06p51700 Brassica napus
C09p62870 Brassica napus
CANSAT01G1113 Cannabis sativa
CANSAT64G2639 Cannabis sativa
CARHR071260 Cardamine hirsuta
CARHR199010 Cardamine hirsuta
Carub.0002s2465 Capsella rubella
Carub.0006s1251 Capsella rubella
Ca_15219_v3 Cicer arietinum L.
Ca_16127_v3 Cicer arietinum L.
Ca_18855_v3 Cicer arietinum L.
Ca_30304_v3 Cicer arietinum L.
CBR_g31492 Chara braunii
Cc00_g12510 Coffea canephora
Cc03_g13480 Coffea canephora
CDE03G0430 Ceratophyllum demersum
CDE06G2485 Ceratophyllum demersum
Cfa015965 Carpinus fangiana
Cfa015966 Carpinus fangiana
Ciclev10002692m.g Citrus clementina
Ciclev10022660m.g Citrus clementina
CiPaw.05G227800 Carya illinoinensis
CiPaw.05G227900 Carya illinoinensis
ClCG03G009300 Citrullus lanatus
COL.COLO4_35745 Corchorus olitorius
Cpa.g.sc36.2 Carica papaya
Cpa.g.sc36.3 Carica papaya
Cre12.g493950 Chlamydomonas reinhardtii
CsaV3_2G026730 Cucumis sativus L.
CsaV3_2G026750 Cucumis sativus L.
CsaV3_5G023320 Cucumis sativus L.
CsaV3_5G023340 Cucumis sativus L.
CSS0011291 Camellia sinensis var. sinensis
DCAR_002816 Daucus carota
Dinv27376 Davidia involucrata
Duzib093G0986 Durio zibethinus
Duzib116G0045 Durio zibethinus
ECA233G0129 Erigeron canadensis
EL10Ac1g00030 Beta vulgaris
Eucgr.F03746 Eucalyptus grandis
Eucgr.L03087 Eucalyptus grandis
FAN15G3196 Fragaria x ananassa
FAN20G1615 Fragaria x ananassa
FAN24G2189 Fragaria x ananassa
FAN27G1674 Fragaria x ananassa
FvH4_2g26171 Fragaria vesca
FvH4_2g26180 Fragaria vesca
Glyma.02G078000 Glycine max
Glyma.04G253300 Glycine max
Glyma.06G109300 Glycine max
Gohir.A02G074600 Gossypium hirsutum
Gohir.A06G041400 Gossypium hirsutum
Gohir.D02G081600 Gossypium hirsutum
Gohir.D06G042300 Gossypium hirsutum
Gorai.005G091500 Gossypium raimondii
Gorai.010G047600 Gossypium raimondii
GSVIVG01008933001 Vitis vinifera
HanXRQChr01g0005481 Helianthus annuus
Haze_00516 Corylus avellana
Haze_00517 Corylus avellana
Haze_01263 Corylus avellana
Haze_27169 Corylus avellana
Haze_27170 Corylus avellana
Hma1.2p1_0009F.1_g006010 Hydrangea macrophylla
Hma1.2p1_0842F.1_g227130 Hydrangea macrophylla
HPP92_019612 Vanilla planifolia
Hund16826 Selenicereus undatus
Hund27050 Selenicereus undatus
Lalb_Chr08g0241661 Lupinus albus
Lalb_Chr17g0339621 Lupinus albus
Lj1g0023800 Lotus japonicus
Lj3g0011570 Lotus japonicus
Lj7A308T12 Lonicera japonica
Lsat_1_v5_gn_1_90901 Lactuca sativa
Manes.02G159400 Manihot esculenta
Manes.18G073608 Manihot esculenta
Mapoly0001s0161 Marchantia polymorpha
MCO01G196 Micromonas commoda
MD05G1042800 Malus domestica
MD10G1050000 Malus domestica
MD10G1050100 Malus domestica
Medtr3g073140 Medicago truncatula
Medtr4g081120 Medicago truncatula
MELO3C003061.2 Cucumis melo
MELO3C027211.2 Cucumis melo
Migut.C01183 Erythranthe guttata
MSTRG.25408 Avicennia marina
Nitab4.5_0001474g0080 Nicotiana tabacum
Nitab4.5_0004963g0040 Nicotiana tabacum
Nn1g08613 Nelumbo nucifera
Nn1g08918 Nelumbo nucifera
Nn1g08919 Nelumbo nucifera
Oeu005371.1 Olea europaea
Oeu030031.1 Olea europaea
Os03g0704000 Oryza sativa ssp. japonica
Peaxi162Scf00421g00412 Petunia axillaris
PGR042G3107 Punica granatum
PGR044G0108 Punica granatum
PGSC0003DMG400004122 Solanum tuberosum
Phvul.008G213500 Phaseolus vulgaris
Phvul.009G121100 Phaseolus vulgaris
Potri.002G088300 Populus trichocarpa
Potri.002G088400 Populus trichocarpa
Potri.005G172600 Populus trichocarpa
Pp3c15_12110 Physcomitrium patens
Pp3c15_12140 Physcomitrium patens
Pp3c24_11830 Physcomitrium patens
Pp3c9_7220 Physcomitrium patens
PRCOL_00004293 Prasinoderma coloniale
Prupe.1G504800 Prunus persica
Prupe.1G504900 Prunus persica
Psat5g134240 Pisum sativum
Psat7g162680 Pisum sativum
PSO170G5539 Papaver somniferum
PSO528G0104 Papaver somniferum
QL02p049208 Quercus lobata
QL09p037161 Quercus lobata
QL09p037177 Quercus lobata
RcHm_v2.0_Chr6g0294601 Rosa chinensis
RcHm_v2.0_Chr6g0294611 Rosa chinensis
Rhsim04G0111700 Rhododendron simsii
Rhsim04G0111800 Rhododendron simsii
Rhsim04G0112300 Rhododendron simsii
Rhsim04G0112400 Rhododendron simsii
Rhsim11G0065700 Rhododendron simsii
Sabra02G0069600 Salix brachista
Sabra05G0130200 Salix brachista
SalBow4G0670 Salvia bowleyana
Sc23g0000890 Simmondsia chinensis
Sed0017097 Sechium edule
Sed0020376 Sechium edule
SEGI_00658 Sequoiadendron giganteum
SMO364G0129 Selaginella moellendorffii
SMO367G0840 Selaginella moellendorffii
Solyc05g005880.2 Solanum lycopersicum
Sopen05g001900 Solanum pennellii
Sp5g32920 Schrenkiella parvula
Sp6g29730 Schrenkiella parvula
TAR628G0608 Trochodendron aralioides
THA.LOC104800179 Tarenaya hassleriana
THA.LOC104800180 Tarenaya hassleriana
THA.LOC104813646 Tarenaya hassleriana
Thecc.08G117800 Theobroma cacao
Thecc.08G117900 Theobroma cacao
Thhalv10014848m.g Eutrema salsugineum
Thhalv10019274m.g Eutrema salsugineum
TPR.G29521 Trifolium pratense
TWI12G1198 Tripterygium wilfordii
TWI56G0910 Tripterygium wilfordii
vmacro00798 Vaccinium macrocarpon
vmacro21512 Vaccinium macrocarpon
VMungo1215G1631 Vigna mungo
VMungo1215G1787 Vigna mungo
Zm00001eb054380 Zea mays

User provided reference genes

Program Settings