Gene: Sopen05g001900

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g001900
  • Transcript Identifier Sopen05g001900.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 777182-778697 : positive

Gene Family Information

  • ID HOM05D002940
  • #Genes/#Species 234/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g001900.1

Descriptions

  • Description Ribosomal protein S13/S18 family | FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleic acid binding | INVOLVED IN: translation | LOCATED IN: small ribosomal subunit, chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein S13-like, H2TH , Ribosomal protein S13 | BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S18 family
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003676
IEA
InterPronucleic acid binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G14320

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
InterProribosome
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G14320
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G14320
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G77750
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT5G14320
GO:0005763
ISO
PLAZA Integrative Orthologymitochondrial small ribosomal subunit AT1G77750

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027437 30s ribosomal protein S13, C-terminal
IPR019980 Ribosomal protein S13, bacterial-type
IPR001892 Ribosomal protein S13
IPR010979 Ribosomal protein S13-like, H2TH
Mapman id Description
17.7.1.2.11 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS13 or psRPS13
17.7.2.2.13 Protein biosynthesis.organelle machinery.plastidial ribosome.small ribosomal subunit proteome.component psRPS13 or mtRPS13