Gene: AT5G14320

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G14320
  • Transcript Identifier AT5G14320.1
  • Gene Type Coding gene
  • Location Chr5 : 4617839-4618772 : negative

Gene Family Information

  • ID HOM05D002940
  • #Genes/#Species 234/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G14320.1
  • symbol EMB3137
  • full_name EMBRYO DEFECTIVE 3137
  • uniprot P42732

Descriptions

  • Description Ribosomal protein S13/S18 family
  • Computational description Ribosomal protein S13/S18 family; FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleic acid binding; INVOLVED IN: translation; LOCATED IN: small ribosomal subunit, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S13, bacterial-type (InterPro:IPR019980), Ribosomal protein S13-like, H2TH (InterPro:IPR010979), Ribosomal protein S13, conserved site (InterPro:IPR018269), Ribosomal protein S13 (InterPro:IPR001892); BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S18 family (TAIR:AT1G77750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
Gene Ontologytranslation
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003735
IEA
Gene Ontologystructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003723
IEA
Gene OntologyRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0019843
IEA
GOA DatabaserRNA binding
GO:0003729
IDA
Gene OntologymRNA binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
IDA
GOA Databasechloroplast stroma
GO:0009570
HDA
Gene Ontologychloroplast stroma2
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0009536
IEA
GOA Databaseplastid
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast3
GO:0009941
IDA
GOA Databasechloroplast envelope
GO:0009941
HDA
Gene Ontologychloroplast envelope4
GO:0005739
IBA
Gene Ontologymitochondrion5
GO:0015935
IBA
Gene Ontologysmall ribosomal subunit5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR019980 Ribosomal protein S13, bacterial-type
IPR010979 Ribosomal protein S13-like, H2TH
IPR027437 30s ribosomal protein S13, C-terminal
IPR001892 Ribosomal protein S13
Mapman id Description
17.7.1.2.11 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS13 or psRPS13
17.7.2.2.13 Protein biosynthesis.organelle machinery.plastidial ribosome.small ribosomal subunit proteome.component psRPS13 or mtRPS13