Gene: arahy.Tifrunner.gnm1.ann1.ZDY2DP

General Information

Structural Information

  • Species Arachis hypogaea
  • Gene Identifier arahy.Tifrunner.gnm1.ann1.ZDY2DP
  • Transcript Identifier arahy.Tifrunner.gnm1.ann1.ZDY2DP.1
  • Gene Type Coding gene
  • Location arahy.Tifrunner.gnm1.Arahy.10 : 15887010-15891128 : positive

Gene Family Information

  • ID HOM05D002940
  • #Genes/#Species 234/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id arahy.Tifrunner.gnm1.ann1.ZDY2DP.v1.0
  • pacid 42618455

Descriptions

  • Description PF00416//PF06058 - Ribosomal protein S13/S18 (Ribosomal_S13) // Dcp1-like decapping family (DCP1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
InterProtranslation
GO:0000290
IEA
InterProdeadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0043085
IEA
InterPropositive regulation of catalytic activity

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003676
IEA
InterPronucleic acid binding
GO:0008047
IEA
InterProenzyme activator activity
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G14320

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
InterProribosome
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G14320
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G14320
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT5G14320

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001892 Ribosomal protein S13
IPR010979 Ribosomal protein S13-like, H2TH
IPR019980 Ribosomal protein S13, bacterial-type
IPR010334 mRNA-decapping enzyme subunit 1
IPR011993 PH-like domain superfamily
Mapman id Description
16.4.2.2.1 RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.mRNA decapping complex.regulatory component DCP1
17.7.1.2.11 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS13 or psRPS13
17.7.2.2.13 Protein biosynthesis.organelle machinery.plastidial ribosome.small ribosomal subunit proteome.component psRPS13 or mtRPS13