Gene: AT1G77750

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G77750
  • Transcript Identifier AT1G77750.1
  • Gene Type Coding gene
  • Location Chr1 : 29230346-29231490 : negative

Gene Family Information

  • ID HOM05D002940
  • #Genes/#Species 234/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G77750.1
  • uniprot Q9CA19

Descriptions

  • Description Ribosomal protein S13/S18 family
  • Computational description Ribosomal protein S13/S18 family; FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleic acid binding; INVOLVED IN: translation; LOCATED IN: mitochondrion, small ribosomal subunit, mitochondrial small ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S13, conserved site (InterPro:IPR018269), Ribosomal protein S13-like, H2TH (InterPro:IPR010979), Ribosomal protein S13 (InterPro:IPR001892); BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S18 family (TAIR:AT5G14320.1); Has 8693 Blast hits to 8691 proteins in 3066 species: Archae - 159; Bacteria - 5380; Metazoa - 191; Fungi - 172; Plants - 691; Viruses - 0; Other Eukaryotes - 2100 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
Gene Ontologytranslation
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
Gene Ontologystructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0019843
IEA
GOA DatabaserRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005739
IDA
ISM, IBA
Gene Ontologymitochondrion1 2
GO:0015935
IBA
Gene Ontologysmall ribosomal subunit2
GO:0009507
IDA
Gene Ontologychloroplast1
GO:0005763
TAS
Gene Ontologymitochondrial small ribosomal subunit1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010979 Ribosomal protein S13-like, H2TH
IPR001892 Ribosomal protein S13
IPR027437 30s ribosomal protein S13, C-terminal
Mapman id Description
17.7.1.2.11 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS13 or psRPS13
17.7.2.2.13 Protein biosynthesis.organelle machinery.plastidial ribosome.small ribosomal subunit proteome.component psRPS13 or mtRPS13