Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p03450 Brassica napus
A06p03460 Brassica napus
Aa31LG10G4120 Aethionema arabicum
Aa31LG10G4140 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4585 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3955 Anthoceros agrestis
Actinidia04385 Actinidia chinensis
Actinidia13033 Actinidia chinensis
Actinidia34361 Actinidia chinensis
Ah.01g006980 Amaranthus hybridus
Ah.01g006990 Amaranthus hybridus
AL1G57540 Arabidopsis lyrata
AL1G57550 Arabidopsis lyrata
Aqoxy6G02626 Aquilegia oxysepala
Aqoxy6G02627 Aquilegia oxysepala
Aqoxy6G02637 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9CW0PF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AK2UKD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JJ1SBB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TT8B4F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y568PT Arachis hypogaea
AT1G49980 Arabidopsis thaliana
ATR1153G103 Amborella trichopoda
Atru.chr5.2347 Acer truncatum
Atru.chr5.2348 Acer truncatum
Atru.chr5.2351 Acer truncatum
AUR62027003 Chenopodium quinoa
AUR62027007 Chenopodium quinoa
AUR62030843 Chenopodium quinoa
AUR62030846 Chenopodium quinoa
AUR62036501 Chenopodium quinoa
BcaB07g33450 Brassica carinata
BcaC08g43176 Brassica carinata
BolC6t35605H Brassica oleracea
BolC6t35606H Brassica oleracea
BraA06t23553Z Brassica rapa
BraA06t23554Z Brassica rapa
C06p04750 Brassica napus
C06p04760 Brassica napus
CAN.G606.59 Capsicum annuum
CAN.G606.60 Capsicum annuum
CANSAT35G0667 Cannabis sativa
CARHR040030 Cardamine hirsuta
CARHR040040 Cardamine hirsuta
Carub.0001s3917 Capsella rubella
Carub.0001s3918 Capsella rubella
Ca_21777_v3 Cicer arietinum L.
Ca_24359_v3 Cicer arietinum L.
CBR_g3894 Chara braunii
CBR_g41215 Chara braunii
Cc02_g19860 Coffea canephora
Cc02_g19870 Coffea canephora
Cc02_g19880 Coffea canephora
Cc06_g00270 Coffea canephora
CDE04G2041 Ceratophyllum demersum
CDE04G2933 Ceratophyllum demersum
CDE06G0830 Ceratophyllum demersum
Cfa004626 Carpinus fangiana
Cfa004654 Carpinus fangiana
Cfa004660 Carpinus fangiana
Cfa009507 Carpinus fangiana
Cfa010108 Carpinus fangiana
Cfa021534 Carpinus fangiana
Cfa026792 Carpinus fangiana
Ciclev10006219m.g Citrus clementina
Ciclev10007042m.g Citrus clementina
Ciclev10027948m.g Citrus clementina
Ciclev10029201m.g Citrus clementina
CiPaw.05G017800 Carya illinoinensis
CiPaw.05G017900 Carya illinoinensis
CiPaw.06G165500 Carya illinoinensis
ClCG02G006830 Citrullus lanatus
ClCG10G010270 Citrullus lanatus
COL.COLO4_32514 Corchorus olitorius
Cpa.g.c33107 Carica papaya
Cpa.g.sc1019.1 Carica papaya
Cpa.g.sc106.47 Carica papaya
Cpa.g.sc106.48 Carica papaya
Cre02.g079850 Chlamydomonas reinhardtii
Cre05.g247150 Chlamydomonas reinhardtii
CsaV3_4G000220 Cucumis sativus L.
CsaV3_7G007810 Cucumis sativus L.
CSS0011953 Camellia sinensis var. sinensis
CSS0041876 Camellia sinensis var. sinensis
DCAR_001699 Daucus carota
DCAR_021953 Daucus carota
Dinv15807 Davidia involucrata
Dinv15808 Davidia involucrata
Duzib132G1128 Durio zibethinus
ECA234G2213 Erigeron canadensis
ECA236G3688 Erigeron canadensis
EL10Ac9g22200 Beta vulgaris
EL10Ac9g22202 Beta vulgaris
Eucgr.G01218 Eucalyptus grandis
Eucgr.I01062 Eucalyptus grandis
FAN20G2089 Fragaria x ananassa
FAN20G2596 Fragaria x ananassa
FAN24G3289 Fragaria x ananassa
FAN27G0944 Fragaria x ananassa
FvH4_2g04342 Fragaria vesca
FvH4_2g04350 Fragaria vesca
Glyma.01G242400 Glycine max
Glyma.05G021200 Glycine max
Glyma.11G001900 Glycine max
Glyma.17G078200 Glycine max
Gohir.A03G182500 Gossypium hirsutum
Gohir.A12G019700 Gossypium hirsutum
Gohir.D02G204100 Gossypium hirsutum
Gohir.D12G019900 Gossypium hirsutum
Gorai.005G231400 Gossypium raimondii
Gorai.008G020300 Gossypium raimondii
GSVIVG01037836001 Vitis vinifera
GSVIVG01037837001 Vitis vinifera
HanXRQChr01g0025491 Helianthus annuus
HanXRQChr16g0509311 Helianthus annuus
Haze_10221 Corylus avellana
Haze_10256 Corylus avellana
Haze_10257 Corylus avellana
Hma1.2p1_1059F.1_g252980 Hydrangea macrophylla
HPP92_003268 Vanilla planifolia
HPP92_015730 Vanilla planifolia
Hund00428 Selenicereus undatus
Hund00429 Selenicereus undatus
Hund00691 Selenicereus undatus
Lalb_Chr05g0210781 Lupinus albus
Lalb_Chr06g0165111 Lupinus albus
Lj1g0007638 Lotus japonicus
Lj4g0011899 Lotus japonicus
Lj5A219G36 Lonicera japonica
Lj5A219T41 Lonicera japonica
Lsat_1_v5_gn_1_103341 Lactuca sativa
Lsat_1_v5_gn_7_85120 Lactuca sativa
Manes.10G081500 Manihot esculenta
Manes.10G081600 Manihot esculenta
Mapoly0121s0028 Marchantia polymorpha
MBI11_g46322_MAGBIO Magnolia biondii
MCO07G531 Micromonas commoda
MCO12G139 Micromonas commoda
MD05G1100100 Malus domestica
MD05G1100400 Malus domestica
MD05G1100500 Malus domestica
Medtr4g109520 Medicago truncatula
Medtr5g005030 Medicago truncatula
MELO3C018011.2 Cucumis melo
MELO3C018521.2 Cucumis melo
Migut.B00487 Erythranthe guttata
Migut.N01136 Erythranthe guttata
Migut.O00567 Erythranthe guttata
MSTRG.16679 Avicennia marina
MSTRG.27764 Avicennia marina
Nitab4.5_0001105g0010 Nicotiana tabacum
Nitab4.5_0001105g0030 Nicotiana tabacum
Nitab4.5_0008075g0040 Nicotiana tabacum
Nitab4.5_0008075g0070 Nicotiana tabacum
Nn1g04560 Nelumbo nucifera
Nn3g19581 Nelumbo nucifera
Nn5g29163 Nelumbo nucifera
Nn5g30580 Nelumbo nucifera
Oeu010448.1 Olea europaea
Oeu010450.1 Olea europaea
Oeu013792.1 Olea europaea
Os03g0616300 Oryza sativa ssp. japonica
Os10g0350800 Oryza sativa ssp. japonica
Peaxi162Scf00016g02839 Petunia axillaris
Peaxi162Scf00016g02932 Petunia axillaris
PGR042G1700 Punica granatum
PGR120G0011 Punica granatum
PGR142G0748 Punica granatum
PGSC0003DMG400025743 Solanum tuberosum
PGSC0003DMG400025744 Solanum tuberosum
Phvul.002G051600 Phaseolus vulgaris
Phvul.003G185000 Phaseolus vulgaris
Potri.001G293600 Populus trichocarpa
Potri.001G293700 Populus trichocarpa
Potri.009G088200 Populus trichocarpa
Pp3c5_10320 Physcomitrium patens
PRCOL_00006042 Prasinoderma coloniale
PRCOL_00006372 Prasinoderma coloniale
Prupe.8G144800 Prunus persica
Prupe.8G144900 Prunus persica
Psat0s3618g0120 Pisum sativum
Psat4g227480 Pisum sativum
Psat5g177040 Pisum sativum
Psat6g103080 Pisum sativum
Psat7g253280 Pisum sativum
PSO541G0380 Papaver somniferum
PSO541G1205 Papaver somniferum
PSO675G0546 Papaver somniferum
PSO675G1022 Papaver somniferum
QL07p014111 Quercus lobata
QL07p014115 Quercus lobata
QL11p030559 Quercus lobata
QL11p030572 Quercus lobata
RcHm_v2.0_Chr6g0253801 Rosa chinensis
RcHm_v2.0_Chr6g0253811 Rosa chinensis
Rhsim05G0090800 Rhododendron simsii
Sabra09G0068300 Salix brachista
Sabra16G0183400 Salix brachista
SalBow3G3786 Salvia bowleyana
Sc14g0002920 Simmondsia chinensis
Sc14g0002940 Simmondsia chinensis
Sc14g0002950 Simmondsia chinensis
Sc18g0007410 Simmondsia chinensis
Sc18g0007450 Simmondsia chinensis
Sed0001102 Sechium edule
Sed0016408 Sechium edule
SEGI_03434 Sequoiadendron giganteum
SEGI_11563 Sequoiadendron giganteum
SGA_v2.0_scaffold219G42527 Striga asiatica
SGA_v2.0_scaffold225G43045 Striga asiatica
SHI27436 Sapria himalayana
SHI27438 Sapria himalayana
SMO361G0227 Selaginella moellendorffii
SMO364G0103 Selaginella moellendorffii
Solyc01g107010.3 Solanum lycopersicum
Solyc01g107020.4 Solanum lycopersicum
Sopen01g049280 Solanum pennellii
Sopen01g049290 Solanum pennellii
Sp1g36870 Schrenkiella parvula
SpUN0137_0010 Schrenkiella parvula
SpUn0137_0020 Schrenkiella parvula
TAR381G0324 Trochodendron aralioides
TAR381G0590 Trochodendron aralioides
THA.LOC104803441 Tarenaya hassleriana
THA.LOC104803442 Tarenaya hassleriana
Thecc.02G117000 Theobroma cacao
Thecc.02G117100 Theobroma cacao
Thhalv10011295m.g Eutrema salsugineum
Thhalv10011799m.g Eutrema salsugineum
TPR.G2009 Trifolium pratense
TPR.G8313 Trifolium pratense
TWI14G1023 Tripterygium wilfordii
TWI14G1369 Tripterygium wilfordii
unitig_21.g20718 Utricularia gibba
unitig_749.g13509 Utricularia gibba
vmacro19465 Vaccinium macrocarpon
vmacro19533 Vaccinium macrocarpon
vmacro23229 Vaccinium macrocarpon
VMungo1215G1214 Vigna mungo
VMungo1215G1881 Vigna mungo
Zm00001eb019030 Zea mays
Zm00001eb219080 Zea mays

User provided reference genes

Program Settings