Gene: Potri.001G293600
General Information
Structural Information
- Species Populus trichocarpa
- Gene Identifier Potri.001G293600
- Transcript Identifier Potri.001G293600.1
- Gene Type Coding gene
- Location Chr01 : 30534205-30541657 : positive
Gene Family Information
- ID HOM05D002857
- #Genes/#Species 242/100
- Phylogenetic origin
- ID ORTHO05D007919
- #Genes/#Species 125/93
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id Potri.001G293600.v4.1
- pacid 42792520
- synonym POPTR_0001s30070
Descriptions
- Description K03511 - DNA polymerase kappa (POLK)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006281 | IEA | InterPro | DNA repair |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003684 | IEA | InterPro | damaged DNA binding | |
| GO:0003887 | IEA | InterPro | DNA-directed DNA polymerase activity | |
| GO:0003697 | ISO | PLAZA Integrative Orthology | single-stranded DNA binding | AT1G49980 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR017961 | DNA polymerase, Y-family, little finger domain |
| IPR024728 | DNA polymerase type-Y, HhH motif |
| IPR041298 | DNA polymerase eta, ubiquitin-binding zinc finger |
| IPR036775 | DNA polymerase, Y-family, little finger domain superfamily |
| IPR001126 | UmuC domain |
| IPR043128 | Reverse transcriptase/Diguanylate cyclase domain |
| IPR022880 | DNA polymerase IV |
| IPR043502 | DNA/RNA polymerase superfamily |
| Mapman id | Description |
|---|---|
| 14.2.3 | DNA damage response.DNA repair polymerase activities.DNA polymerase kappa (POLK) |