Gene: Solyc01g107010.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc01g107010.3
- Transcript Identifier Solyc01g107010.3.1
- Gene Type Coding gene
- Location SL4.0ch01 : 87005949-87011316 : positive
Gene Family Information
- ID HOM05D002857
- #Genes/#Species 242/100
- Phylogenetic origin
- ID ORTHO05D007919
- #Genes/#Species 125/93
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc01g107010.3.1
- uniprot A0A3Q7ES02
- gene_id Solyc01g107010
Descriptions
- Description DNA polymerase kappa (AHRD V3.3 *** A0A2G2V759_CAPBA)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006281 | IEA | GOA Database | DNA repair | |
| GO:0006281 | IEA | InterPro | DNA repair | |
| GO:0042276 | IBA | GOA Database | error-prone translesion synthesis |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003684 | IEA | GOA Database | damaged DNA binding | |
| GO:0003684 | IEA | InterPro | damaged DNA binding | |
| GO:0003887 | IBA IEA | GOA Database | DNA-directed DNA polymerase activity | |
| GO:0003887 | IEA | InterPro | DNA-directed DNA polymerase activity | |
| GO:0003697 | ISO | PLAZA Integrative Orthology | single-stranded DNA binding | AT1G49980 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IBA IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036775 | DNA polymerase, Y-family, little finger domain superfamily |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR017961 | DNA polymerase, Y-family, little finger domain |
| IPR041298 | DNA polymerase eta, ubiquitin-binding zinc finger |
| IPR043128 | Reverse transcriptase/Diguanylate cyclase domain |
| IPR001126 | UmuC domain |
| IPR022880 | DNA polymerase IV |
| Mapman id | Description |
|---|---|
| 14.2.3 | DNA damage response.DNA repair polymerase activities.DNA polymerase kappa (POLK) |